SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene81788

Length: 531 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene81788

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI	-	-	1.0e-27	96%
FL-Next	sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	96%
Blast2go	protein	-	-	3.43614e-29	90%

Source	GOs	Term	Type	e value	Identity
Blast2go	cytosolic small ribosomal subunit	GO:0022627	Cellular Component	3.43614e-29	90%

Source	InterPros	Term	Type	e value	Identity
Sma3	Ribosomal protein S21e	IPR001931	-	0.0	-
Sma3	Ribosomal protein S21e, conserved site	IPR018279	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 11)

Position	A %	C %	G %	T %	Probability
241	75		25		0.996476
248	25	75			0.996476
249	75	25			0.996476
250	75	25			0.996476
253	66		33		0.997452
254	66		33		0.997452
255	66	33			0.997452
257	66		33		0.997452
262	33		66		0.997452
264	66			33	0.997452
266	33	66			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain