SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene81774

Length: 594 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene81774

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	60S ribosomal protein L10 n=2 Tax=Pinaceae RepID=RL10_PINTA	-	-	1.0e-31	76%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	84%
Blast2go	60s ribosomal protein l10	-	-	2.08878e-31	82%

Source	InterPros	Term	Type	Identity
Sma3	Ribosomal protein L10e	IPR001197	-	-
Sma3	Acid phosphatase (Class B)	IPR005519	-	-
Sma3	Acid phosphatase, plant	IPR010028	-	-
Sma3	Ribosomal protein L10e/L16	IPR016180	-	-
Sma3	Ribosomal protein L10e, conserved site	IPR018255	-	-

Full-Lengther Next Prediction

SNPs (tot: 12)

Position	A %	C %	G %	T %	Probability
6		66		33	0.997476
8	33			66	0.997456
9	33		66		0.997456
15		33	66		0.997458
19		33	66		0.997467
20	33			66	0.997471
24			33	66	0.997461
26	66	33			0.997476
39			20	80	0.995493
40			20	80	0.995493
41		80	20		0.995493
55			50	50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain