SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene81659

Length: 606 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene81659

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Stress-induced hydrophobic peptide n=1 Tax=Populus trichocarpa RepID=B9N409_POPTR	-	-	9.0e-11	64%
FL-Next	tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%
Blast2go	hydrophobic protein lti6a	-	-	1.21266e-14	93%

Source	InterPros	Term	Type	e value	Identity
Sma3	Proteolipid membrane potential modulator	IPR000612	-	0.0	-
Sma3	Extracellular solute-binding protein, family 3, conserved site	IPR018313	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 14)

Position	A %	C %	G %	T %	Probability
188		87		12	0.992554
325		12	87		0.992555
327	87			12	0.992555
328			12	87	0.992555
331		12		87	0.99256
334			12	87	0.99256
336		14		85	0.993533
339			85	14	0.993533
341	14	85			0.993533
342	85	14			0.993533
344	85	14			0.993533
401	40		60		1.0
459	80		20		0.995494
464		20	80		0.995505

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain