SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene81545

Length: 427 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene81545

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Defensin n=1 Tax=Ginkgo biloba RepID=Q670N7_GINBI	-	-	1.0e-16	48%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	49%
Blast2go	defensin precursor	-	-	1.10594e-21	65%

Source	GOs	Term	Type	e value	Identity
Blast2go	defense response to fungus	GO:0050832	Biological Process	1.10594e-21	65%
Blast2go	defense response to Gram-negative bacterium	GO:0050829	Biological Process	1.10594e-21	65%
Blast2go	extracellular region	GO:0005576	Cellular Component	1.10594e-21	65%

Full-Lengther Next Prediction

SNPs (tot: 9)

Position	A %	C %	G %	T %	Probability
125	75		25		0.996476
126		75		25	0.996476
127		25		75	0.996476
128	75		25		0.996476
135		66		33	0.997452
142		33		66	0.997452
143	33		66		0.997452
146		33	66		0.997452
147	33			66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain