SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene81500

Length: 672 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene81500

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 10 [Arabidopsis thaliana] ref\|NP_001118655.1\| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 10 [Arabidopsis thaliana] sp\|Q94C12.1\|NDBAB_ARATH RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcom	-	-	2.0e-35	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	98%
Blast2go	nadh dehydrogenase	-	-	0.0	84%

Source	GOs	Term	Type	e value	Identity
Blast2go	photorespiration	GO:0009853	Biological Process	0.0	84%
Blast2go	mitochondrial respiratory chain complex I	GO:0005747	Cellular Component	0.0	84%

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
57			33	66	0.999106
58			33	66	0.997453
59	33		66		0.999106
69			33	66	0.997452
70			25	75	0.996486
72			25	75	0.99649
82		66	16		0.988813
83		66	33		1.0
99	92		8		0.999718
102		88	12		1.0
103	88		8	4	0.999262
105			12	88	1.0
106		92	8		0.999718

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain