SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene80816

Length: 1012 nt

Origin of reads: Inia v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene80816

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	V-type proton ATPase subunit G 1 n=3 Tax=Solanaceae RepID=VATG1_TOBAC	-	-	2.0e-35	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	93%
Blast2go	vacuolar atp synthase subunit g	-	-	0.0	87%

Source	GOs	Term	Type	Identity
Blast2go	transport	GO:0006810	Biological Process	87%
Blast2go	plasma membrane	GO:0005886	Cellular Component	87%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	87%

Source	InterPros	Term	Type	e value	Identity
Sma3	Vacuolar (H+)-ATPase G subunit	IPR005124	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 49)

Position	A %	C %	G %	T %	Probability
170			57	42	1.0
191			11	88	0.92373
193		11	88		0.92373
197			11	88	0.923834
198	11			88	0.923834
199		11	88		0.92373
200	88	11			0.92373
204			12	87	0.992554
207			12	87	0.992554
208	87			12	0.992554
212	87	12			0.992554
216	12		87		0.992554
323	14	71			0.984337
327		14	85		0.993533
358			20	80	0.995499
359	20			80	0.995497
363	20		80		0.995503
364		80		20	0.995503
367	80			20	0.995503
369			80	20	0.995503
375	80	20			0.995497
377		20		80	0.995493
380	80			20	0.995494
382		80		20	0.995495
384			20	80	0.995493
385		75		25	0.996474
386		75		25	0.996474
391		33	33	33	0.997753
392	33			66	0.997476
393			33	66	0.997476
396	33			66	0.997459
398			33	66	0.997459
400	66		33		0.997452
403		33	66		0.997452
577			25	75	0.996481
582			25	75	0.996481
597	66			33	0.997452
598		33	66		0.997452
784	16		83		0.994512
827		25		75	0.996473
830	75			25	0.996473
832		75	25		0.996473
834	75			25	0.996473
886	33			66	0.997476
887	33	66			0.997476
888		33		66	0.997471
892		33		66	0.997476
893		33	66		0.997476
894	33		66		0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain