SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene80761

Length: 486 nt

UniGene Fasta

>sp_v2.0_unigene80761
ATGACGGCAGCATAATATCTTCAGAGCCGTGCGCTCTTGAAATTGCAATGTGAAATAATCGTGTAGGTAGCACGAGATCTGGAAAATGACCGCGGTTTTGGCCAAATGTCAGTCTCGTCCCATGAGCGTTCACTAAAATTCGGTGAATACAAGTTCCTTCTGCGCATTGATCTGTATTATCTCATATTCAGCAATGGACAAAATACAGCACAAGCGAGTTCAGGTTAGAGAGCTTAATTTACACGTTGCAGAGATTGGATCAGGTCCGGCTGTGTTGTTATTGCATGGATTTCCAGAGATATGGTATTCATGGCGTCATCAGATGACAGCGTTGGCAGAGTCTGGGTTTCATGCAATTGCTCCCGACTTTCGAGGCTATGGACTCTCTGATCAGCCATCTGAACCAGAGAAAGCTGCATATTATGACCTTGTAGAAGACACAGTTGGCCTGCTTGATGCCTTGGGTATTGAGAAAGCGTTTATTGG

Ace file of the UniGene sp_v2.0_unigene80761

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Epoxide hydrolase n=2 Tax=Nicotiana RepID=Q9ZP87_TOBAC	-	-	2.0e-33	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%
Blast2go	epoxide hydrolase 2-like	-	-	0.0	81%

Source	InterPros	Term	Type	e value	Identity
Sma3	Alpha/beta hydrolase fold-1	IPR000073	-	0.0	-
Sma3	Epoxide hydrolase-like	IPR000639	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5ACP4

Fln msg: Distance to subject end: 216 aas, your sequence is shorter than subject: 97 - 321

Fln protein: MDKIQHKRVQVRELNLHVAEIGSGPAVLLLHGFPEIWYSWRHQMTALAESGFHAIAPDFRGYGLSDQPSEPEKAAYYDLVEDTVGLLDALGIEKAFI

Protein Length: 98

Fln nts: ATGACGGCAGCATAATATCTTCAGAGCCGTGCGCTCTTGAAATTGCAATGTGAAATAATCGTGTAGGTAGCACGAGATCTGGAAAATGACCGCGGTTTTGGCCAAATGTCAGTCTCGTCCCATGAGCGTTCACTAAAATTCGGTGAATACAAGTTCCTTCTGCGCATTGATCTGTATTATCTCATATTCAGCA_-_ATGGACAAAATACAGCACAAGCGAGTTCAGGTTAGAGAGCTTAATTTACACGTTGCAGAGATTGGATCAGGTCCGGCTGTGTTGTTATTGCATGGATTTCCAGAGATATGGTATTCATGGCGTCATCAGATGACAGCGTTGGCAGAGTCTGGGTTTCATGCAATTGCTCCCGACTTTCGAGGCTATGGACTCTCTGATCAGCCATCTGAACCAGAGAAAGCTGCATATTATGACCTTGTAGAAGACACAGTTGGCCTGCTTGATGCCTTGGGTATTGAGAAAGCGTTTATTGG

Fln Alignment:

AllPineV4_rep_c133452___ISYSAMDKIQHKRVQVRELNLHVAEIGSGPAVLLLHGFPEIWYSWRHQMTALAESGFHAIAPDFRGYGLSDQPSEPEKAAYYDLVEDTVGLLDALGIEKAFI
D5ACP4_______________IDPSAMDKIQHKQVDVGGLNLHVAEIGSGPAVLLLHGFPEIWYSWRYQMIALAEAGFHAIAPDFRGYGLSDQPSEPEKAAYYDLVEDMAGLLDALSIEKGFV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain