SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene80592

Length: 580 nt

Origin of reads: Biogeco1 v2 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene80592

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Cytosolic ascorbate peroxidase n=4 Tax=Magnoliophyta RepID=B3TM10_ELAGV	-	-	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	81%
Blast2go	ascorbate peroxidase	-	-	84%

Source	ECs	Term	Type	e value	Identity
Blast2go	L-ascorbate peroxidase.	EC:1.11.1.11	-	0.0	84%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Ascorbate and aldarate metabolism	00053		0.0	84%
Blast2go	Glutathione metabolism	00480		0.0	84%

Source	GOs	Term	Type	Identity
Blast2go	response to oxidative stress	GO:0006979	Biological Process	84%
Blast2go	L-ascorbate peroxidase activity	GO:0016688	Molecular Function	84%
Blast2go	cytosol	GO:0005829	Cellular Component	84%

Source	InterPros	Term	Type	Identity
Sma3	Plant ascorbate peroxidase	IPR002207	-	-
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	-
Sma3	Peroxidase, active site	IPR019794	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-

Full-Lengther Next Prediction

SNPs (tot: 9)

Position	A %	C %	G %	T %	Probability
417	40	60			1.0
419	40			60	1.0
420	40	60			1.0
422			40	60	1.0
423	40		60		1.0
425		60	40		1.0
426		60	40		1.0
429			60	40	1.0
442	66	33			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain