SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene78860

Length: 635 nt

Origin of reads: Uagpf v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene78860 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Lysyl-tRNA synthetase (Fragment) n=6 Tax=Magnoliophyta RepID=D7U9T8_VITVI	-	-	74%
FL-Next	sp=Lysyl-tRNA synthetase; Oryza sativa subsp. japonica (Rice).	-	-	66%
Blast2go	lysyl-trna synthetase	-	-	78%

Source	ECs	Term	Type	e value	Identity
Blast2go	Lysine--tRNA ligase.	EC:6.1.1.6	-	0.0	78%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Aminoacyl-tRNA biosynthesis	00970		0.0	78%

Source	GOs	Term	Type	e value	Identity
Blast2go	lysine-tRNA ligase activity	GO:0004824	Molecular Function	0.0	78%

Source	InterPros	Term	Type	Identity
Sma3	Lysyl-tRNA synthetase, class II	IPR002313	-	-
Sma3	Aminoacyl-tRNA synthetase, class II (D/K/N)	IPR004364	-	-
Sma3	Nucleic acid binding, OB-fold, tRNA/helicase-type	IPR004365	-	-
Sma3	Aminoacyl-tRNA synthetase, class II	IPR006195	-	-
Sma3	Nucleic acid-binding, OB-fold	IPR012340	-	-
Sma3	Lysyl-tRNA synthetase, class II, C-terminal	IPR018149	-	-
Sma3	Aminoacyl-tRNA synthetase, class II (D/K/N)-like	IPR018150	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain