SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene78617

Length: 867 nt

Origin of reads: Uagpf v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene78617 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	sp=Uncharacterized protein At3g49720; Arabidopsis thaliana (Mouse-ear cress).	-	-	45%
Blast2go	uncharacterized protein	-	-	60%

Source	GOs	Term	Type	Identity
Blast2go	Golgi apparatus	GO:0005794	Cellular Component	60%
Blast2go	plasma membrane	GO:0005886	Cellular Component	60%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	60%
Blast2go	chloroplast thylakoid membrane	GO:0009535	Cellular Component	60%

Source	InterPros	Term	Type	e value	Identity
Sma3	Pentapeptide repeat	IPR001646	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
368			66	33	0.997476
369			66	33	0.997476
371		66		33	0.997476
372	66		33		0.997471
376		66	33		0.997471

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain