SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene77509

Length: 765 nt

Origin of reads: Biogeco1 v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene77509 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb\|AAD55471.1\|AC009322_11 Unknown protein [Arabidopsis thaliana] gb\|AAK59496.1\| unknown protein [Arabidopsis thaliana] gb\|AAL34192.1\| unknown protein [Arabidopsis thaliana] gb\|AAM65	-	-	1.0e-07	48%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	64%
Blast2go	tetratricopeptide repeat domain-containing protein	-	-	0.0	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to oxidative stress	GO:0006979	Biological Process	0.0	72%
Blast2go	membrane	GO:0016020	Cellular Component	0.0	72%

Source	InterPros	Term	Type	e value	Identity
Sma3	Tetratricopeptide-like helical	IPR011990	-	0.0	-
Sma3	Tetratricopeptide repeat-containing domain	IPR013026	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
109		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain