SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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ECs
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene77279

Length: 808 nt

Origin of reads: Biogeco1 v2 Uagpf v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene77279 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	nudC domain-containing protein [Arabidopsis thaliana] dbj\|BAA97317.1\| unnamed protein product [Arabidopsis thaliana] gb\|AAO23639.1\| At5g53400 [Arabidopsis thaliana] dbj\|BAE99321.1\| hypothetical protein [Arabidopsis thaliana] gb\|AED96348.1\| nudC domain-con	-	-	1.0e-23	45%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	49%
Blast2go	protein	-	-	5.41367e-27	60%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein folding	GO:0006457	Biological Process	5.41367e-27	60%
Blast2go	embryonic pattern specification	GO:0009880	Biological Process	5.41367e-27	60%
Blast2go	response to heat	GO:0009408	Biological Process	5.41367e-27	60%
Blast2go	cytoplasm	GO:0005737	Cellular Component	5.41367e-27	60%

Source	InterPros	Term	Type	e value	Identity
Sma3	CS-like domain	IPR007052	-	0.0	-
Sma3	CS domain	IPR017447	-	0.0	-

Full-Lengther Next Prediction

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain