SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene76975

Length: 738 nt

Origin of reads: Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene76975

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RZN5_RICCO	-	-	2.0e-15	79%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%
Blast2go	protein	-	-	9.692e-35	87%

Source	InterPros	Term	Type	e value	Identity
Sma3	Zinc finger, CCHC-type	IPR001878	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 28)

Position	A %	C %	G %	T %	Probability
309			75	25	1.0
310	75		25		1.0
311	75		25		1.0
312		25	75		1.0
313	75			25	1.0
318		25	75		1.0
319	75			25	1.0
450	85	14			0.993533
453	85	14			0.993533
458		14		85	0.993533
459		14		85	0.993533
460		85		14	0.993533
461		85		14	0.993533
463	85		14		0.993533
464	85	14			0.993533
466		85	14		0.993533
468		14	85		0.993533
470		14	85		0.993533
570	42		57		1.0
577		50		50	1.0
578	50			50	1.0
582	50		50		1.0
585	50			50	1.0
586		50	50		1.0
587	50		50		1.0
593			50	50	1.0
598	80	20			0.995493
722		33		66	0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain