SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene76825

Length: 726 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene76825

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Pollen allergen n=1 Tax=Pinus radiata RepID=O65013_PINRA	-	-	71%
FL-Next	tr=Pollen allergen; Pinus radiata (Monterey pine) (Pinus insignis).	-	-	71%
Blast2go	expansin-like protein	-	-	64%

Source	InterPros	Term	Type	Identity
Sma3		IPR005132	-	-
Sma3	Major pollen allergen Lol pI	IPR005795	-	-
Sma3	Expansin/pollen allergen, DPBB domain	IPR007112	-	-
Sma3	Pollen allergen/expansin, C-terminal	IPR007117	-	-
Sma3	Expansin/Lol pI	IPR007118	-	-
Sma3		IPR014734	-	-

Full-Lengther Next Prediction

SNPs (tot: 45)

Position	A %	C %	G %	T %	Probability
169	50	25			0.995533
171	75			25	0.996479
173	50	25	25		0.995595
174	25			50	0.998762
175	50		25	25	0.995595
176	75		25		0.99649
180	33	33		33	0.997753
181			66	33	0.997452
183		66	33		0.997452
184	66		33		0.997452
187	66		33		0.997452
190	33	66			0.997452
192			66	33	0.997452
193	66	33			0.997452
194	33	66			0.997452
252	85			14	0.993536
253	85	14			0.993536
256			14	85	0.993536
260		85		14	0.993538
261	83			16	0.994512
265	83	16			0.994512
266			83	16	0.994512
268	83			16	0.994512
274		16	83		0.994512
310	87	12			0.992556
317	14		85		0.993533
318		14	85		0.993533
319		14	85		0.993533
323			14	85	0.993533
328	85			14	0.993533
329	85	14			0.993533
334	14	85			0.993533
359	88			11	0.923596
361		88	11		0.923572
362		88		11	0.923572
365	11			88	0.923566
366	11	88			0.923566
367		87		12	0.992554
373		12		87	0.992554
378	12			87	0.992554
380		87		12	0.992554
381		12	87		0.992554
382	12		87		0.992554
438		16		83	0.994512
573			16	83	0.994513

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain