SustainPineDB

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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene75313

Length: 411 nt

Origin of reads: Uagpf v2

UniGene Fasta

>sp_v2.0_unigene75313
CGTCGTGACCTTGGCTGTCACTCATTCTTCTGGTTATGATGATAGTCCTTTGGCCTACAATGAATACGTTGTCTACGATCCCAACCAGGTGTCTATGCAATATATGGTGAGCATCAAGTTTGAGGTGATTGATTGAAAGTTACAAATTGGTGACATCTGAAGTCTCATTCAGTTATGTTTTTGTATATAAAAACCATAACCAATTTTGTATATAAGATCCATAATCAATTTTGGCCACAGTTTTTACTGTATATAAAAACCATAACCAATTTTGTATATAAAATCCTTAACCAATTTTGGCCAGATGGTTTATTGTAAAGAGACTGCTCTAATAATAGTAGTAGCCCTAAGATTTCAGGGTGTAATGGACATTACTGTACATACAGTTCAGCCACACCTCTCCCTTGTATG

Ace file of the UniGene sp_v2.0_unigene75313

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RecName: Full=Putative poly [ADP-ribose] polymerase 3; Short=PARP-3; AltName: Full=NAD(+) ADP-ribosyltransferase 3; Short=ADPRT-3; AltName: Full=Poly[ADP-ribose] synthase 3	-	-	9.0e-05	55%
FL-Next	sp=Putative poly [ADP-ribose] polymerase 3; Medicago truncatula (Barrel medic) (Medicago tribuloides).	-	-	0.0	55%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: Q1SGF1

Fln msg: your sequence is shorter than subject: 45 - 799

Fln protein: VVTLAVTHSSGYDDSPLAYNEYVVYDPNQVSMQYMVSIKFEVID*

Protein Length: 46

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTCTTCTGGTTATGATGATAGTCCTTTGGCCTACAATGAATACGTTGTCTACGATCCCAACCAGGTGTCTATGCAATATATGGTGAGCATCAAGTTTGAGGTGATTGATTGA___AAGTTACAAATTGGTGACATCTGAAGTCTCATTCAGTTATGTTTTTGTATATAAAAACCATAACCAATTTTGTATATAAGATCCATAATCAATTTTGGCCACAGTTTTTACTGTATATAAAAACCATAACCAATTTTGTATATAAAATCCTTAACCAATTTTGGCCAGATGGTTTATTGTAAAGAGACTGCTCTAATAATAGTAGTAGCCCTAAGATTTCAGGGTGTAATGGACATTACTGTACATACAGTTCAGCCACACCTCTCCCTTGTATG

Fln Alignment:

AllPineV4_rep_c109320___SSGYDDSPLAYNEYVVYDPNQVSMQYMVSIKFEVID
Q1SGF1_______________ASEHEDSPLEYNEYAVYDPKQVRISYLVGVKYEEKD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain