SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene74823

Length: 247 nt

UniGene Fasta

>sp_v2.0_unigene74823
CACAGCAGGTCGGGTAACAGACTCGTTATCTTGGCTGTGACTGATTTACTTGCAGATGGTGAGGGGGAAAGTGATGATGAATTTGAAGCATATAAGACATCGGATCTTCCAGAATTCAAAGGGATGGCAGGACTTAAAAACTTCACAACCTTGCAGGAAGATCAAGGAGTTATGACACTGATATATGATTTTTATACCTACATGCTAAAAAGCTCTTTGCCAGAATTTGCATTGGCAATGTTTTCGG

Ace file of the UniGene sp_v2.0_unigene74823

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	64%
Blast2go	predicted protein [Physcomitrella patens subsp. patens]	-	-	1.42121e-20	72%

Source	InterPros	Term	Type	e value	Identity
Sma3	Potassium channel, inwardly rectifying, Kir, cytoplasmic	IPR013518	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9RFD4

Fln msg: Distance to subject end: 276 aas, your sequence is shorter than subject: 82 - 377

Fln protein: HSRSGNRLVILAVTDLLADGEGESDDEFEAYKTSDLPEFKGMAGLKNFTTLQEDQGVMTLIYDFYTYMLKSSLPEFALAMFS

Protein Length: 83

Fln nts: CACAGCAGGTCGGGTAACAGACTCGTTATCTTGGCTGTGACTGATTTACTTGCAGATGGTGAGGGGGAAAGTGATGATGAATTTGAAGCATATAAGACATCGGATCTTCCAGAATTCAAAGGGATGGCAGGACTTAAAAACTTCACAACCTTGCAGGAAGATCAAGGAGTTATGACACTGATATATGATTTTTATACCTACATGCTAAAAAGCTCTTTGCCAGAATTTGCATTGGCAATGTTTTCGG

Fln Alignment:

AllPineV4_c108370___DGEGESDDEFEAYKTSDLPEFKGMAGLKNFTTLQEDQGVMTLIYDFYTYMLKSSLPEFALAMFS
A9RFD4_______________DDDTDSDDEFETFKTSDSPEFRGMQGLNNFHILQQDSGIFSEIYDFYIYMLKKPLPEFACAMFA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain