SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene74507

Length: 316 nt

Origin of reads: Uma v2

UniGene Fasta

>sp_v2.0_unigene74507
TGACAAGGCCGTCATTTATGAATCCAGTATTGGAGGTTCTTCTAGTACTGGATTCCCTGAATTGACTTCCTCAGACCGTCGTGATTACTGGCTAGCATTGATCAAGGAGGTGGTAACTGTGCATAAATTTATTGGCAGGTTTGGTCTCAAAGGCAGAGAAGAAAAGGAGGCAATAGCTAGATCAGTCGTTGGAGTAGTTCGGCTTCATGCAACAAGGGAATCATTTCAGATATTCCCACCATGCCCTCAAACCCTTCTAACTTTACCCTGTTGGAGGAGGTACTGCCAGGAGGTGACTATGTACTTGAAGAAATGG

Ace file of the UniGene sp_v2.0_unigene74507

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF639 domain containing protein	-	-	1.0e-22	40%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	52%
Blast2go	protein	-	-	7.91845e-16	68%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF639	IPR006927	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9RU81

Fln msg: Distance to subject end: 298 aas, your sequence is shorter than subject: 105 - 689

Fln protein: DKAVIYESSIGGSSSTGFPELTSSDRRDYWLALIKEVVTVHKFIGRFGLKGREEKEAIARSVVGVVRLHATRESFQIFPPCPQTLLTLPCWRRYCQEVTMYLKKW

Protein Length: 106

Fln nts: TGACAAGGCCGTCATTTATGAATCCAGTATTGGAGGTTCTTCTAGTACTGGATTCCCTGAATTGACTTCCTCAGACCGTCGTGATTACTGGCTAGCATTGATCAAGGAGGTGGTAACTGTGCATAAATTTATTGGCAGGTTTGGTCTCAAAGGCAGAGAAGAAAAGGAGGCAATAGCTAGATCAGTCGTTGGAGTAGTTCGGCTTCATGCAACAAGGGAATCATTTCAGATATTCCCACCATGCCCTCAAACCCTTCTAACTTTACCCTGTTGGAGGAGGTACTGCCAGGAGGTGACTATGTACTTGAAGAAATGG

Fln Alignment:

AllPineV4_rep_c107614___DKAVIYESSIGGSSST-GFPELTSSDRRDYWLALIKEVVTVHKFIGRFGLKGREEKEAIARSVVGVVRLHATRESF
A9RU81_______________DKAVMYKSSATVEPVVLEFPELTGRSRRDYWLTIIREVVSVHQFIRTYQLEGVGKAEALAKAVLGIARLRATRETF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain