SustainPineDB

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Assembly info
Unigenes
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ECs
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene69877

Length: 364 nt

UniGene Fasta

>sp_v2.0_unigene69877
ATGGGGGCTGTCGTTGGTTGGGTTTCTGTTGTCTCTCCAATAACAGAAGAAAATGAGAGATATCTAGAGACTAAGCGTTCAAAGATGGGCCACATTTTTGGGTCCGATTTACCTGGGTCTGGTGTCTCACATCAAAACTTCAGAAAGAGTGATGCTACGGAGTCTTCATCACCCGAGTGAAAACATGGTTTTATCAGATAACAGAAATGTTGCCATACTTAACAAGTTGCAGTAGCCCTTCTATGCCATTTACATAGTGGGAAAATGTTTCTGTTCATTATCAAATTCTTTTACTGATTTATATTTGTATCCTGGTAAACCCTACTTGCTGGAAGAAATGGTAATTGGGTTATAGTCTGGTAAC

Ace file of the UniGene sp_v2.0_unigene69877

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	'GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase' n=3 Tax=Oryza sativa RepID=Q6L506_ORYSJ	-	-	9.0e-10	76%
FL-Next	sp=Riboflavin biosynthesis protein ribBA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	57%
Blast2go	riboflavin biosynthesis protein ribab	-	-	1.13916e-11	89%

Source	InterPros	Term	Type	Identity
Sma3	3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB	IPR000422	-	-
Sma3	GTP cyclohydrolase II, RibA	IPR000926	-	-
Sma3	Riboflavin biosynthesis protein RibBA	IPR016299	-	-
Sma3	DHBP synthase RibB-like alpha/beta domain	IPR017945	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: P47924

Fln msg: your sequence is shorter than subject: 60 - 543

Fln protein: MGAVVGWVSVVSPITEENERYLETKRSKMGHIFGSDLPGSGVSHQNFRKSDATESSSPE*

Protein Length: 61

Fln nts: ATGGGGGCTGTCGTTGGTTGGGTTTCTGTTGTCTCTCCAATAACAGAAGAAAATGAGAGATATCTAGAGACTAAGCGTTCAAAGATGGGCCACATTTTTGGGTCCGATTTACCTGGGTCTGGTGTCTCACATCAAAACTTCAGAAAGAGTGATGCTACGGAGTCTTCATCACCCGAGTGA___AAACATGGTTTTATCAGATAACAGAAATGTTGCCATACTTAACAAGTTGCAGTAGCCCTTCTATGCCATTTACATAGTGGGAAAATGTTTCTGTTCATTATCAAATTCTTTTACTGATTTATATTTGTATCCTGGTAAACCCTACTTGCTGGAAGAAATGGTAATTGGGTTATAGTCTGGTAAC

Fln Alignment:

AllPineV4_rep_c98195___AVVGWVSVVSPITEENERYLETKRSKMGHIFGSDLPGSGV
P47924_______________AIVGRVPLLSLITKENKRYLETKRTKMGHMYGLKFKGDVV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain