SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene69424

Length: 528 nt

UniGene Fasta

>sp_v2.0_unigene69424
ATGGGGGCAGAAGTCTCTGGAGAGTGTTGAAGTCATTGCTGATCCTTGGAGTCCAGGAACTGCACGCAATTTGAAGTCCATGTTCGGGAATTTTCCTTAGTACTCGTGTGCTCTAGTATTTAACTAATCCATGTGTGTCTCTAGCTGCCAGTATTGTTAGCTTGGTCTGCAAATTAAGCCTTGAGAGTATAGCACAGATTGGTAATTGGTATTTTTCCATCTCCAAAGTTAGGTCGGTTTGATTGTATTTCTAATTTTAGCAGTCCATAATGGTGTTCGGAGCGGTGAAATCTTCAGCAGGGTTTCTCCTGCTGCTGAATTTCTGCATGTATGTAATCGTGGCTGCTATTGCTGGATGGGCTCTTAACAAGGCCATCGATCACCATTACTTCATTGGTCTTATTAATCTCTACCTACGTATACATATGTGGGTGTTTTCTTGGGCTTCTATGCATAACATCTTCTTGTGGTTTGGTGTCTGTCTGATTTATTGTTTGATGAAAACTTGCAGGTGCTGGAGTAACTACT

Ace file of the UniGene sp_v2.0_unigene69424

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	pfam05512, AWPM-19, AWPM-19-like family	-	-	2.0e-09	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	plasma membrane associated protein	-	-	2.39245e-16	77%

Source	InterPros	Term	Type	e value	Identity
Sma3	AWPM-19-like	IPR008390	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NS01

Fln msg: Distance to subject end: 97 aas, your sequence is shorter than subject: 86 - 184

Fln protein: MVFGAVKSSAGFLLLLNFCMYVIVAAIAGWALNKAIDHHYFIGLINLYLRIHMWVFSWASMHNIFLWFGVCLIYCLMKTCRCWSNY

Protein Length: 87

Fln nts: ATGGGGGCAGAAGTCTCTGGAGAGTGTTGAAGTCATTGCTGATCCTTGGAGTCCAGGAACTGCACGCAATTTGAAGTCCATGTTCGGGAATTTTCCTTAGTACTCGTGTGCTCTAGTATTTAACTAATCCATGTGTGTCTCTAGCTGCCAGTATTGTTAGCTTGGTCTGCAAATTAAGCCTTGAGAGTATAGCACAGATTGGTAATTGGTATTTTTCCATCTCCAAAGTTAGGTCGGTTTGATTGTATTTCTAATTTTAGCAGTCCATA_-_ATGGTGTTCGGAGCGGTGAAATCTTCAGCAGGGTTTCTCCTGCTGCTGAATTTCTGCATGTATGTAATCGTGGCTGCTATTGCTGGATGGGCTCTTAACAAGGCCATCGATCACCATTACTTCATTGGTCTTATTAATCTCTACCTACGTATACATATGTGGGTGTTTTCTTGGGCTTCTATGCATAACATCTTCTTGTGGTTTGGTGTCTGTCTGATTTATTGTTTGATGAAAACTTGCAGGTGCTGGAGTAACTACT

Fln Alignment:

AllPineV4_rep_c97154___MVFGAVKSSAGFLLLLNFCMYVIVAAIAGWALNKAIDHH-YFIG
A9NS01_______________MVFGVVKSLAGFLLLLNFCMYVIVAAIAGWALNKAIDHHNYFNG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain