SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene69209

Length: 434 nt

UniGene Fasta

>sp_v2.0_unigene69209
ATGGGGAATCAGAGCCATTCTTTTGCTTCTGCAATCAAATGGAGAAGAAATCCTCAGGGCTCATTATTCTCATCTCCATTCTGCTGATTATGGTTGTCAAAGTCCATGGAGCAGGTGCAAGAGGCCCTTCACACTGGGGAGATCTTAAGGAGGAATGGAGAACCTGCGATAAGGGCAAAGAGCAGTCTCCCATCGATTTGGTGAAGAAGAATATAGAAATATTTCCGAGTTTAGGGAAGTTGCAGAAAAGCTATCGAGCAGCCAATGCATCACTCAAGAATAGAGGCCATGACATTATGGTGAGATGGGCAGAGGGAGCAGGAACAATACGCATAGATGGTACGAGCTTTACTCTGGTCCAATGCCATTGGCATTCTCCTGCTGAGCACACTATCAATGGTAGACGATATCCTTTGGAGATACATATGGTACAA

Ace file of the UniGene sp_v2.0_unigene69209

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Carbonic anhydrase, putative n=1 Tax=Ricinus communis RepID=B9STU9_RICCO	-	-	1.0e-35	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	63%
Blast2go	bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like	-	-	0.0	75%

Source	InterPros	Term	Type	Identity
Sma3	Major intrinsic protein	IPR000425	-	-
Sma3	Alpha carbonic anhydrase	IPR001148	-	-
Sma3	Lipocalin	IPR002345	-	-
Sma3		IPR017909	-	-
Sma3	Carbonic anhydrase, alpha-class, conserved site	IPR018338	-	-
Sma3		IPR018340	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NP26

Fln msg: Distance to subject end: 128 aas, your sequence is shorter than subject: 132 - 271

Fln protein: MEKKSSGLIILISILLIMVVKVHGAGARGPSHWGDLKEEWRTCDKGKEQSPIDLVKKNIEIFPSLGKLQKSYRAANASLKNRGHDIMVRWAEGAGTIRIDGTSFTLVQCHWHSPAEHTINGRRYPLEIHMVQ

Protein Length: 133

Fln nts: ATGGGGAATCAGAGCCATTCTTTTGCTTCTGCAATCAA_-_ATGGAGAAGAAATCCTCAGGGCTCATTATTCTCATCTCCATTCTGCTGATTATGGTTGTCAAAGTCCATGGAGCAGGTGCAAGAGGCCCTTCACACTGGGGAGATCTTAAGGAGGAATGGAGAACCTGCGATAAGGGCAAAGAGCAGTCTCCCATCGATTTGGTGAAGAAGAATATAGAAATATTTCCGAGTTTAGGGAAGTTGCAGAAAAGCTATCGAGCAGCCAATGCATCACTCAAGAATAGAGGCCATGACATTATGGTGAGATGGGCAGAGGGAGCAGGAACAATACGCATAGATGGTACGAGCTTTACTCTGGTCCAATGCCATTGGCATTCTCCTGCTGAGCACACTATCAATGGTAGACGATATCCTTTGGAGATACATATGGTACAA

Fln Alignment:

AllPineV4_rep_c96632___GARGPSHWGDLKEEWRTCDKGKEQSPIDLVKKNIEIFPSLGKLQKSYRAANASLKNRGHDIMVRWAEGAGTIRIDGTSFTLVQCHWHSPAEHTINGRRYPLEIHMV
A9NP26_______________GPKGPEHWGELKEEWKACGRGTQQSPIDVVKRNAIISPNLGTLHRIYHPANATLVNRGHDIMVNWSEGAGSVEIKGKRFTLKQCHWHTPAEHTIDGKQHPLEIHLV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain