SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene68611

Length: 495 nt

UniGene Fasta

>sp_v2.0_unigene68611
GATAATAATGGGTGCTTTACTTGGGATTGGTGTGACAAATGAGAGCATTGGCTCAATCGATTCAGTTCATTCTCCTCATTTTTCCTTAGATGAAGAAGTGCTTCCCCTCAGAGCGGCTTTACATGCAACAATTGCAAAAATGTATTTGGACCATGGGAGACCATTGTGTACAGAGTAGATAAGAATCAATCATTTTTAAAGTAGGAACAAACTTCCAATAAAAGAGACATATTCAAGTTTTATCAGATCTTTTTATGAGTGAAGCAACAAAGCACTTTGCCTTGTCAGTTCAATAGTATCGCGTAAGATTTCTCTGCTCACTTTGGCAAGGAGAGTTAGCATCGTCTCTGTGACTCTAATTAGTGGGACGATATCAACACGTGCCCCGCCTCACTCGAGCAAGGAGAGTTAGCATATAATATGTGACTGATTATTACCAGGCATAATATTACCAAATGTGGATGTACGCTAACTCACGAGGTATTAAATTGAGAT

Ace file of the UniGene sp_v2.0_unigene68611

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ILL5; iaa-amino acid hydrolase 5	-	-	2.0e-09	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	73%
Blast2go	iaa-amino acid hydrolase ilr1-like 5-like	-	-	3.28411e-20	76%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase M20	IPR002933	-	-
Sma3		IPR010168	-	-
Sma3	Peptidase M20, dimerisation	IPR011650	-	-
Sma3	Amidohydrolase	IPR017439	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LMJ2

Fln msg: your sequence is shorter than subject: 59 - 456

Fln protein: IIMGALLGIGVTNESIGSIDSVHSPHFSLDEEVLPLRAALHATIAKMYLDHGRPLCTE*

Protein Length: 60

Fln nts: GATAATAATGGGTGCTTTACTTGGGATTGGTGTGACAAATGAGAGCATTGGCTCAATCGATTCAGTTCATTCTCCTCATTTTTCCTTAGATGAAGAAGTGCTTCCCCTCAGAGCGGCTTTACATGCAACAATTGCAAAAATGTATTTGGACCATGGGAGACCATTGTGTACAGAGTAG___ATAAGAATCAATCATTTTTAAAGTAGGAACAAACTTCCAATAAAAGAGACATATTCAAGTTTTATCAGATCTTTTTATGAGTGAAGCAACAAAGCACTTTGCCTTGTCAGTTCAATAGTATCGCGTAAGATTTCTCTGCTCACTTTGGCAAGGAGAGTTAGCATCGTCTCTGTGACTCTAATTAGTGGGACGATATCAACACGTGCCCCGCCTCACTCGAGCAAGGAGAGTTAGCATATAATATGTGACTGATTATTACCAGGCATAATATTACCAAATGTGGATGTACGCTAACTCACGAGGTATTAAATTGAGAT

Fln Alignment:

AllPineV4_rep_c95144___IIMGALLGIGVTNESIGSIDSVHSPHFSLDEEVLPLRAALHATIAKMYLDHGRPLCT
B8LMJ2_______________IIPGAFFLVGVRNESINSIHSLHSPRFFLDEKVLPLGAALHATIAKMYLDHGGPLST

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain