SustainPineDB

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Assembly info
Unigenes
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ECs
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene67193

Length: 440 nt

UniGene Fasta

>sp_v2.0_unigene67193
AAGAATATTATCATTAATTGGTCTTTTGGGTTATTATTTGTCAACATTTTCAATGGGCATGGGTGGAATTCCATGGGTTTTAATGTCTGAGATATTTCCTTTGAATATGAAGCGTATTGCTGGCAGTCTGGTGTCTCTCACAGCTTGGTTTGGTTCATGGATTGTCACCCTCACTTTTAATTCTCTCTTCTCTTGGAGTTCTACAGCTTCCTTCTTTATATTTTGCATTGTCTGCGCCTTCACTGTGCTATTCGTGGTAAAGCTTGTACCAGAGACAAAGGGACAACTCTAGAAGAAATACAATCTTCTCTCTCATAAAATTCTAGGGGAAGAAATCGGAAGTTTGTCCATAGAATCATGGCTTGGTTGAATTTTATGGTTTGCAATGAAGTTCTCATGAAGAGTCTGTAATTCATTACAAACAATATTCTCTTTACTAA

Ace file of the UniGene sp_v2.0_unigene67193

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ERD sugar transporter-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZF13_PICSI	-	-	2.0e-27	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	erd sugar transporter-like protein	-	-	2.38221e-44	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	transporter activity	GO:0005215	Molecular Function	2.38221e-44	80%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase M14, carboxypeptidase A	IPR000834	-	-
Sma3	Sugar/inositol transporter	IPR003663	-	-
Sma3	General substrate transporter	IPR005828	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Twin-arginine translocation pathway, signal sequence	IPR006311	-	-
Sma3	Major facilitator superfamily	IPR011701	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NXP9

Fln msg: your sequence is shorter than subject: 97 - 388

Fln protein: RILSLIGLLGYYLSTFSMGMGGIPWVLMSEIFPLNMKRIAGSLVSLTAWFGSWIVTLTFNSLFSWSSTASFFIFCIVCAFTVLFVVKLVPETKGQL*

Protein Length: 98

Fln nts: AAGAATATTATCATTAATTGGTCTTTTGGGTTATTATTTGTCAACATTTTCAATGGGCATGGGTGGAATTCCATGGGTTTTAATGTCTGAGATATTTCCTTTGAATATGAAGCGTATTGCTGGCAGTCTGGTGTCTCTCACAGCTTGGTTTGGTTCATGGATTGTCACCCTCACTTTTAATTCTCTCTTCTCTTGGAGTTCTACAGCTTCCTTCTTTATATTTTGCATTGTCTGCGCCTTCACTGTGCTATTCGTGGTAAAGCTTGTACCAGAGACAAAGGGACAACTCTAG___AAGAAATACAATCTTCTCTCTCATAAAATTCTAGGGGAAGAAATCGGAAGTTTGTCCATAGAATCATGGCTTGGTTGAATTTTATGGTTTGCAATGAAGTTCTCATGAAGAGTCTGTAATTCATTACAAACAATATTCTCTTTACTAA

Fln Alignment:

AllPineV4_rep_c91802___TFSMGMGGIPWVLMSEIFPLNMKRIAGSLVSLTAWFGSWIVTLTFNSLFSWSSTASFFIFCIVCAFTVLFVVKLVPETKGQ
A9NXP9_______________TFSIGMGGIPWVIMSEIFPLNMKRIAGSLVSLTAWLGSWIVTLTFNSLFSWSDAACFFIFCVVCAFTVLFVVKLVPETKGR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain