SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene66738

Length: 731 nt

Origin of reads: Biogeco3 v1

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene66738 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	ribulose-phosphate 3-epimerase transit form [Expression vector pFL505]	-	-	83%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	91%
Blast2go	ribulose-phosphate 3- chloroplastic-like	-	-	85%

Source	ECs	Term	Type	e value	Identity
Blast2go	Ribulose-phosphate 3-epimerase.	EC:5.1.3.1	-	0.0	85%

Source	KEGGs	Term	Identity
Blast2go	Pentose phosphate pathway	00030	85%
Blast2go	Pentose and glucuronate interconversions	00040	85%
Blast2go	Carbon fixation in photosynthetic organisms	00710	85%
Blast2go	Metabolic pathways	01100	85%
Blast2go	Biosynthesis of secondary metabolites	01110	85%

Source	GOs	Term	Type	Identity
Blast2go	response to cold	GO:0009409	Biological Process	85%
Blast2go	metabolic process	GO:0008152	Biological Process	85%
Blast2go	response to nematode	GO:0009624	Biological Process	85%
Blast2go	protein binding	GO:0005515	Molecular Function	85%
Blast2go	ribulose-phosphate 3-epimerase activity	GO:0004750	Molecular Function	85%
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	85%
Blast2go	chloroplast thylakoid membrane	GO:0009535	Cellular Component	85%
Blast2go	chloroplast stroma	GO:0009570	Cellular Component	85%
Blast2go	stromule	GO:0010319	Cellular Component	85%
Blast2go	apoplast	GO:0048046	Cellular Component	85%

Source	InterPros	Term	Type	Identity
Sma3	Ribulose-phosphate 3-epimerase	IPR000056	-	-
Sma3	Glucose-inhibited division protein A-related	IPR002218	-	-
Sma3	Glucose-inhibited division protein A	IPR004416	-	-
Sma3	TonB box, conserved site	IPR010916	-	-
Sma3	Aldolase-type TIM barrel	IPR013785	-	-

Full-Lengther Next Prediction

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain