SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene65181

Length: 657 nt

Origin of reads: Biogeco1 v2 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene65181

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Nucleoside transporter n=3 Tax=Andropogoneae RepID=B6T345_MAIZE	-	-	54%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	62%
Blast2go	equilibrative nucleoside transporter 4-like	-	-	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	nucleoside transmembrane transporter activity, against a concentration gradient	GO:0010174	Molecular Function	0.0	77%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	0.0	77%

Source	InterPros	Term	Type	e value	Identity
Sma3	Equilibrative nucleoside transporter	IPR002259	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 15)

Position	A %	C %	G %	T %	Probability
69		25		75	0.996479
72		50	50		1.0
73		75	25		0.996479
74	66			33	0.997452
75	66		33		0.997452
77	66	33			0.997452
78		25		75	0.996483
84		75	25		0.996474
89		66		33	0.997452
93		25	75		0.99649
94			75	25	0.99649
95		25	75		0.99649
110	75		25		0.996476
244		75		25	0.996473
313	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain