SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene64952

Length: 440 nt

Origin of reads: Uma v2

UniGene Fasta

>sp_v2.0_unigene64952
CGTCGTGACCTTGGCTGTCACTCAGTCCAAGATCATTTAGACATGGGAACTAAAGGTGAGTCACAGAGTCTTGCAGAGGGCATGACATGTTCAGAGCATTCAAACTTTCATCTTGATTCAACCCCTGCAGAGTCTGACTGGGAGCAGGTAAGTGAGATTAGAGTTGAGGATAACATCCTGCTAGGGAAAGAGACAGAAGGTGTAGATGAGGAATCCATGACAGTTCAATATTCAGACACCGAGGAAGTGAAGATTGAGGACTCAGACAAGGATGAGCCTGTTAGTGATGCAGTTATTGCTGAAGCTGAAGCCATAGCTCATGAGTTGCAGATTATAAAGAATGCAGATCTTGAAGAATTGCGAGAACTTGGTTCTGGCACCTTTGGAACAGTATTCCATGGCAAATGGAGGGGATCGGATGTTGCAATTAAACGAATTAA

Ace file of the UniGene sp_v2.0_unigene64952

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S555_RICCO	-	-	1.0e-13	53%
FL-Next	tr=Serine/threonine protein kinase, putative; Ricinus communis (Castor bean).	-	-	0.0	69%
Blast2go	serine threonine protein	-	-	2.588e-15	62%

Source	InterPros	Term	Type	Identity
Sma3	Phox/Bem1p	IPR000270	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Glycoside hydrolase, chitinase active site	IPR001579	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Beta tubulin, autoregulation binding site	IPR013838	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9S555

Fln msg: Distance to subject end: 256 aas, your sequence is shorter than subject: 146 - 1325

Fln protein: RRDLGCHSVQDHLDMGTKGESQSLAEGMTCSEHSNFHLDSTPAESDWEQVSEIRVEDNILLGKETEGVDEESMTVQYSDTEEVKIEDSDKDEPVSDAVIAEAEAIAHELQIIKNADLEELRELGSGTFGTVFHGKWRGSDVAIKRI

Protein Length: 147

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGTCCAAGATCATTTAGACATGGGAACTAAAGGTGAGTCACAGAGTCTTGCAGAGGGCATGACATGTTCAGAGCATTCAAACTTTCATCTTGATTCAACCCCTGCAGAGTCTGACTGGGAGCAGGTAAGTGAGATTAGAGTTGAGGATAACATCCTGCTAGGGAAAGAGACAGAAGGTGTAGATGAGGAATCCATGACAGTTCAATATTCAGACACCGAGGAAGTGAAGATTGAGGACTCAGACAAGGATGAGCCTGTTAGTGATGCAGTTATTGCTGAAGCTGAAGCCATAGCTCATGAGTTGCAGATTATAAAGAATGCAGATCTTGAAGAATTGCGAGAACTTGGTTCTGGCACCTTTGGAACAGTATTCCATGGCAAATGGAGGGGATCGGATGTTGCAATTAAACGAATTAA

Fln Alignment:

AllPineV4_rep_c85502___SDTEEVKIEDSDKDEPVSDXXXXXXXXXXXXXXXXKNADLEELRELGSGTFGTVFHGKWRGSDVAIKRI
B9S555_______________TDFDDINDENGDKDNSISDAVIAEMEASIYGLQIIKNADLEELKELGSGTYGTVYHGKWRGTDVAIKRI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain