SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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ECs
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene63882

Length: 585 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene63882

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	expansin-like B1 [Arabidopsis thaliana] sp\|O23547.2\|EXLB1_ARATH RecName: Full=Expansin-like B1; Short=At-EXPR1; Short=AtEXLB1; Short=AtEXPR1; AltName: Full=Ath-ExpBeta-3.1; Flags: Precursor gb\|AAO64802.1\| At4g17030 [Arabidopsis thaliana] dbj\|BAF00176.1\| E	-	-	1.0e-18	41%
FL-Next	tr=Expansin-like protein; Cunninghamia lanceolata (China fir).	-	-	0.0	36%
Blast2go	expansin-like protein	-	-	1.78774e-24	58%

Full-Lengther Next Prediction

SNPs (tot: 41)

Position	A %	C %	G %	T %	Probability
108	33		33	33	0.997752
110			33	66	0.997464
111	33	66			0.997464
113	66	33			0.997464
114			66	33	0.997464
133			66	33	0.997454
144		25	75		0.996477
146		80		20	0.995496
147	60	20	20		0.992564
148			80	20	0.995497
149		20	60	20	0.992567
150		25	75		0.996473
151		60		20	0.99255
152	75		25		0.996473
153	75	25			0.996473
154	50	50			1.0
155	60	20		20	0.992609
156	60			40	1.0
158	60		40		1.0
164	40			60	1.0
167		40	60		1.0
168	40		60		1.0
227			80	20	0.995505
237	75		25		0.996473
254	80		20		0.995493
257		33	66		1.0
259			66	33	1.0
263		71	28		1.0
264	28			71	1.0
266		33		66	1.0
269		14	28	57	1.0
270			28	71	1.0
277		28	71		1.0
280	16	16			0.988813
281	14			85	0.993541
287		16	83		0.994512
289			16	83	0.994512
392	14		85		0.993538
396			71	28	1.0
415		85	14		0.993535
423	14		71		0.984337

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain