SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene63745

Length: 837 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene63745

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] ref\|NP_849835.1\| cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] ref\|NP_001031215.1\| cleavage and polyadenylation specificity factor subu	-	-	1.99965e-42	57%
FL-Next	sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	57%
Blast2go	protein	-	-	0.0	76%

Source	InterPros	Term	Type	e value	Identity
Sma3	Beta-lactamase-like	IPR001279	-	0.0	-
Sma3	RNA-metabolising metallo-beta-lactamase	IPR011108	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
467		50	50		1.0
482		50		50	1.0
504	16		83		0.994512
530	40	60			1.0
539		60		40	1.0
547		40		60	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain