SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene63503

Length: 385 nt

UniGene Fasta

>sp_v2.0_unigene63503
CCTTCCATTATCTTCTACATTGCGTTCCTCAATGTGGGCAATTCATCTTCCTGGGAAATATGGAAATGGTGTTCTGGTGACCTTTTCTGTCCTAAATATATTGTTTTTCTTCAATGTGGATATCATATTCTGGATCATCAGCTTACTGCAGAAGAGCACTTGGTTGATAGATTTGTACTGGACTGTATTGCCTGTGATGATGGCTTACTATTATGCTACTCATCCCTACTCTCAGACGAATATATGGAGATCGAGGGTTGTGATATTTTTGACATGTGTATGGAGCATTCGTCTCACACACAGTTACTTTAGAAGGGAAGAATGGCAGTGGGGAGCCAGGGAGGACTGGAGATTCGCTGATCTGCGAAGCGCTATGCCAAGCATT

Ace file of the UniGene sp_v2.0_unigene63503

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	oxidoreductase, acting on the CH-CH group of donors	-	-	1.0e-35	67%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	0.0	67%
Blast2go	uncharacterized protein	-	-	0.0	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	cell part	GO:0044464	Cellular Component	0.0	80%

Source	InterPros	Term	Type	e value	Identity
Sma3	3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal	IPR001104	-	0.0	-
Sma3	Protein of unknown function DUF1295	IPR010721	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9I976

Fln msg: Distance to subject end: 173 aas, your sequence is shorter than subject: 128 - 326

Fln protein: LPLSSTLRSSMWAIHLPGKYGNGVLVTFSVLNILFFFNVDIIFWIISLLQKSTWLIDLYWTVLPVMMAYYYATHPYSQTNIWRSRVVIFLTCVWSIRLTHSYFRREEWQWGAREDWRFADLRSAMPSI

Protein Length: 129

Fln nts: CCTTCCATTATCTTCTACATTGCGTTCCTCAATGTGGGCAATTCATCTTCCTGGGAAATATGGAAATGGTGTTCTGGTGACCTTTTCTGTCCTAAATATATTGTTTTTCTTCAATGTGGATATCATATTCTGGATCATCAGCTTACTGCAGAAGAGCACTTGGTTGATAGATTTGTACTGGACTGTATTGCCTGTGATGATGGCTTACTATTATGCTACTCATCCCTACTCTCAGACGAATATATGGAGATCGAGGGTTGTGATATTTTTGACATGTGTATGGAGCATTCGTCTCACACACAGTTACTTTAGAAGGGAAGAATGGCAGTGGGGAGCCAGGGAGGACTGGAGATTCGCTGATCTGCGAAGCGCTATGCCAAGCATT

Fln Alignment:

AllPineV4_c78167___VLNILFFFNVDIIFWIISLLQKSTWLIDLYWTVLPVMMAYYYATHPYSQTNIWRSRVVIFLTCVWSIRLTHSYFRREEWQWGAREDWRFADLR
B9I976_______________LVNALFFFNVNVLFWIISQIQKSHWMIDLYWTVIPMLLVYYYATYPLAQYNLWRSRIVIALTWIWSLRLTHNYFRREKWQWGVREDWRFTDMR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain