SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene62648

Length: 838 nt

Origin of reads: Biogeco1 v2 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene62648

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DnaJ/Hsp40 domain-containing protein [Arabidopsis thaliana] ref\|NP_850714.1\| DnaJ/Hsp40 domain-containing protein [Arabidopsis thaliana] emb\|CAB68140.1\| dnaJ-like protein [Arabidopsis thaliana] dbj\|BAH19912.1\| AT3G57340 [Arabidopsis thaliana] gb\|AEE79643.	-	-	9.0e-16	38%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	91%
Blast2go	protein	-	-	0.0	69%

Source	InterPros	Term	Type	Identity
Sma3	Heat shock protein DnaJ, N-terminal	IPR001623	-	-
Sma3	Heat shock protein DnaJ	IPR003095	-	-
Sma3	Tetratricopeptide repeat-containing domain	IPR013026	-	-
Sma3	Tetratricopeptide TPR2	IPR013105	-	-
Sma3	Domain of unknown function DUF1977, DnaJ-like	IPR015399	-	-
Sma3		IPR015609	-	-
Sma3	Heat shock protein DnaJ, conserved site	IPR018253	-	-

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
316	75	25			0.996473
317			25	75	0.996473
321	75			25	0.996473
325		25		75	0.996473
326		25	75		0.996473
329	75		25		0.996473
331		25	75		0.996473
332			75	25	0.996473
333	75		25		0.996473
335		25		75	0.996473
338	75			25	0.996473
339	75	25			0.996473
340	25		75		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain