SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene62312

Length: 1011 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene62312

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI	-	-	4.0e-34	100%
FL-Next	sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	100%
Blast2go	protein	-	-	8.71572e-35	94%

Source	GOs	Term	Type	e value	Identity
Blast2go	cytosolic small ribosomal subunit	GO:0022627	Cellular Component	8.71572e-35	94%

Source	InterPros	Term	Type	e value	Identity
Sma3	Ribosomal protein S21e	IPR001931	-	0.0	-
Sma3	Ribosomal protein S21e, conserved site	IPR018279	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
558		11		88	0.923564
614	83		16		0.994512

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain