SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene61995

Length: 344 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene61995

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	transcription factor DcMYB3-1 [Daucus carota]	-	-	2.0e-10	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	91%
Blast2go	myb transcription factor	-	-	1.94754e-30	81%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to jasmonic acid stimulus	GO:0009753	Biological Process	1.94754e-30	81%
Blast2go	response to salicylic acid stimulus	GO:0009751	Biological Process	1.94754e-30	81%
Blast2go	positive regulation of trichoblast fate specification	GO:0010063	Biological Process	1.94754e-30	81%
Blast2go	protein binding	GO:0005515	Molecular Function	1.94754e-30	81%
Blast2go	nucleus	GO:0005634	Cellular Component	1.94754e-30	81%

Source	InterPros	Term	Type	Identity
Sma3		IPR012287	-	-
Sma3	Myb domain, DNA-binding	IPR017930	-	-
Sma3		IPR014778	-	-
Sma3	Myb transcription factor	IPR015495	-	-
Sma3	SANT/Myb domain	IPR001005	-	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	Probability
152		50	50	1.0
253	66		33	1.0
292	66		33	0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain