SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene61705

Length: 897 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene61705

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	cytidine deaminase1 [Zea mays] gb\|ABL74483.1\| putative cytidine deaminase [Zea mays] gb\|ABL74484.1\| putative cytidine deaminase [Zea mays] gb\|ACG46623.1\| cytidine/deoxycytidylate deaminase family protein [Zea mays]	-	-	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	70%
Blast2go	cytidine deoxycytidylate deaminase-like protein	-	-	67%

Source	InterPros	Term	Type	Identity
Sma3	CMP/dCMP deaminase, zinc-binding	IPR002125	-	-
Sma3	TonB box, conserved site	IPR010916	-	-
Sma3	APOBEC/CMP deaminase, zinc-binding	IPR016192	-	-

Full-Lengther Next Prediction

SSRs (tot: 1)

Start position	End position	Sequence	Length
72	87	AGGAC AGGAC AGGAC A	16

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain