SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene61584

Length: 692 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene61584

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RVT_1 domain containing protein	-	-	8.0e-09	40%
FL-Next	sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.	-	-	0.0	40%
Blast2go	uncharacterized protein loc100259900	-	-	0.0	62%

Source	InterPros	Term	Type	Identity
Sma3	G-patch domain	IPR000467	-	-
Sma3	Reverse transcriptase	IPR000477	-	-
Sma3	Tobamoviral movement protein	IPR001022	-	-
Sma3	Integrase, catalytic core	IPR001584	-	-
Sma3	Zinc finger, CCHC-type	IPR001878	-	-
Sma3	Ribonuclease H domain	IPR002156	-	-
Sma3	KID repeat	IPR003900	-	-
Sma3	Amino acid permease domain	IPR004841	-	-
Sma3	Retrotransposon gag protein	IPR005162	-	-
Sma3	Nitrite/sulphite reductase iron-sulphur/siroheam-binding site	IPR006066	-	-
Sma3	Zinc finger, PMZ-type	IPR006564	-	-
Sma3	Fatty acid hydroxylase	IPR006694	-	-
Sma3	Zinc finger, SWIM-type	IPR007527	-	-
Sma3	Peptidase aspartic, catalytic	IPR009007	-	-
Sma3	Reverse transcriptase, RNA-dependent DNA polymerase	IPR013103	-	-
Sma3	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	-
Sma3	Beta tubulin, autoregulation binding site	IPR013838	-	-
Sma3	DNA methylase, N-4 cytosine-specific, conserved site	IPR017985	-	-
Sma3	Aldo/keto reductase, conserved site	IPR018170	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	MULE transposase domain	IPR018289	-	-

Full-Lengther Next Prediction

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain