SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene61011

Length: 693 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene61011

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Knolle n=1 Tax=Capsicum annuum RepID=Q9SML5_CAPAN	-	-	6.0e-15	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	48%
Blast2go	syntaxin-related protein knolle	-	-	1.02667e-16	70%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	1.02667e-16	70%
Blast2go	phragmoplast	GO:0009524	Cellular Component	1.02667e-16	70%
Blast2go	endomembrane system	GO:0012505	Cellular Component	1.02667e-16	70%
Blast2go	cell plate	GO:0009504	Cellular Component	1.02667e-16	70%
Blast2go	plasma membrane	GO:0005886	Cellular Component	1.02667e-16	70%

Source	InterPros	Term	Type	Identity
Sma3	Target SNARE coiled-coil domain	IPR000727	-	-
Sma3	Tyrosinase	IPR002227	-	-
Sma3	Syntaxin, N-terminal	IPR006011	-	-
Sma3	Syntaxin/epimorphin, conserved site	IPR006012	-	-
Sma3	Uncharacterised domain, di-copper centre	IPR008922	-	-

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
297	16			83	0.994512
383	33		66		1.0
406	71			28	1.0
420	87		12		0.992554
460		80		20	0.995493
469	20			80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain