SustainPineDB

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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene60880

Length: 205 nt

UniGene Fasta

>sp_v2.0_unigene60880
CGTCGTGACCTTGGCTGTCACTCAGCGTGATTTATTGGAACGTTTGGCAAGAGAAATATCTCAACGTGTTTCTCAAGGCACAACGACACTGCTTCACATGAGCTATGAATTGGCGGGGGACCTGGGGAGATCTTTCTCTGAACGAGCAGTATTAGATTCTTTCTTCTTGGCTGAGACAAAAATTGCTGCTGGTTCTATGAAGGAT

Ace file of the UniGene sp_v2.0_unigene60880

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Acyl-CoA oxidase, putative n=1 Tax=Ricinus communis RepID=B9SGN6_RICCO	-	-	3.0e-07	44%
FL-Next	sp=Acyl-coenzyme A oxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	80%
Blast2go	acyl-coenzyme a oxidase peroxisomal	-	-	3.33381e-21	68%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PTG5

Fln msg: Distance to subject end: 81 aas, your sequence is shorter than subject: 68 - 680

Fln protein: VVTLAVTQRDLLERLAREISQRVSQGTTTLLHMSYELAGDLGRSFSERAVLDSFFLAETKIAAGSMKD

Protein Length: 69

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGCGTGATTTATTGGAACGTTTGGCAAGAGAAATATCTCAACGTGTTTCTCAAGGCACAACGACACTGCTTCACATGAGCTATGAATTGGCGGGGGACCTGGGGAGATCTTTCTCTGAACGAGCAGTATTAGATTCTTTCTTCTTGGCTGAGACAAAAATTGCTGCTGGTTCTATGAAGGAT

Fln Alignment:

AllPineV4_c66040___QRDLLERLAREISQRVSQGTTTLLH--MSYELAGDLGRSFSERAVLDSFFLAETKIAAGSMKD
C0PTG5_______________ERDLLERLAAEISQCVSQGTTTAVAFTMSYELAEDLGRAFSERAVLDSFILAETKLAAGSMKD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain