SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene60577

Length: 1062 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene60577

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative DnaJ protein n=1 Tax=Camellia sinensis RepID=Q2L989_CAMSI	-	-	4.0e-31	44%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	84%
Blast2go	protein	-	-	0.0	67%

Source	GOs	Term	Type	Identity
Blast2go	response to stress	GO:0006950	Biological Process	67%
Blast2go	chloroplast stroma	GO:0009570	Cellular Component	67%
Blast2go	nucleus	GO:0005634	Cellular Component	67%

Source	InterPros	Term	Type	Identity
Sma3	Heat shock protein DnaJ, N-terminal	IPR001623	-	-
Sma3	Heat shock protein DnaJ	IPR003095	-	-
Sma3		IPR015609	-	-

Full-Lengther Next Prediction

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
724		14		85	0.999981
789		84		15	0.999986
799	84		15		0.999986
931		50	50		1.0
932	20	80			0.995493
938		83		16	0.994519
966	20		80		0.995493
1017	66	33			0.997452
1023		33	66		0.997452
1026	66		33		0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain