SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene60487

Length: 1037 nt

Origin of reads: Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene60487

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Porin n=4 Tax=Picea RepID=O24244_PICAB	-	-	81%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	81%
Blast2go	aquaporin pip1-1	-	-	85%

Source	GOs	Term	Type	Identity
Blast2go	response to water deprivation	GO:0009414	Biological Process	85%
Blast2go	water transport	GO:0006833	Biological Process	85%
Blast2go	response to salt stress	GO:0009651	Biological Process	85%
Blast2go	water channel activity	GO:0015250	Molecular Function	85%
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	85%
Blast2go	vacuole	GO:0005773	Cellular Component	85%
Blast2go	anchored to plasma membrane	GO:0046658	Cellular Component	85%
Blast2go	mitochondrion	GO:0005739	Cellular Component	85%

Source	InterPros	Term	Type	Identity
Sma3	Major intrinsic protein	IPR000425	-	-
Sma3	Aminoacyl-tRNA synthetase, class I, conserved site	IPR001412	-	-
Sma3	Aquaporin	IPR012269	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NNZ4

Fln msg: Unexpected stop codon in the beginning of your sequence,

Fln protein: L*GGYCRIMATFLFLYITILTVMGVKDATDICGGSVGIQGIAWAFGGMIFCLVYCTAGISGGHINPAVTFGLFLARKLSLPRALLYMVCQCLGAMCGAGVVKGFNPSQYEVNGGGANTVAHGYT*GDGLGADIVGTFFLVYTVFLATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA*SSGAVIPFDISFACHDHWIFWIVPFIDAALDDSPHSNRSPLFLSHPFLTNFFSVLFLPRFFFLLHPPHFPTHYAIFCSRPPLIFVVSTRSTHVLTTPPWYAIQYRRPASPR*

Protein Length: 302

Fln nts: TCTATAGGGCGGGTATTGCAGAATCATGGCGACTTTCTTGTTTCTTTACATCACGATCCTCACAGTCATGGGTGTCAAGGACGCCACGGATATTTGCGGCGGTTCCGTGGGAATTCAGGGGATTGCATGGGCGTTTGGTGGGATGATTTTCTGTCTGGTTTATTGCACAGCTGGGATTTCAGGTGGGCACATTAACCCTGCTGTGACTTTTGGGCTGTTCTTGGCAAGAAAGCTGTCGCTGCCCAGGGCGCTGCTCTACATGGTATGCCAGTGTTTGGGAGCCATGTGTGGCGCTGGAGTTGTGAAGGGCTTCAATCCGAGCCAGTATGAGGTTAATGGAGGAGGCGCTAACACAGTGGCGCATGGCTACACATAGGGAGACGGCTTGGGGGCCGATATAGTGGGCACCTTCTTTCTCGTTTACACGGTTTTCTTGGCCACCGATGCCAAACGAAGTGCCAGGGATTCTCACGTTCCTATCCTGGCGCCACTTCCCATAGGGTTCGCAGTTTTTCTGGTCCACCTTGCAACAATTCCCATCACCGGAACTGGCATCAACCCGGCTTGAAGTTCGGGAGCTGTCATCCCCTTCGACATCAGCTTTGCCTGTCACGATCATTGGATCTTCTGGATTGTCCCATTCATCGATGCCGCCTTGGATGACTCCCCGCATTCCAATCGTTCCCCTCTTTTCCTCTCCCACCCTTTTCTTACCAATTTCTTCTCGGTCCTTTTTCTCCCCCGTTTTTTTTTCCTTCTTCACCCTCCACACTTCCCTACCCACTACGCTATATTTTGCTCCCGCCCTCCCCTAATTTTCGTCGTCAGCACCCGTTCGACTCATGTCCTGACTACCCCACCATGGTACGCTATTCAATACCGGCGTCCAGCGTCCCCGCGATAG___CCATTTTTCTTCGACCATTTCTATATCCTTTCACCACCCCCACACACCCCACTATCTATTTCCTATTGCGTTCAGTCTTTCCCACCTCCCCGTATTCTTGCGTTTCCTCTTATCCCCTACCACTCCCCCGTCC

Fln Alignment:

AllPineV4_rep_c63896___GYCRIMATFLFLYITILTVMGVKDATDICGGSVGIQGIAWAFGGMIFCLVYCTAGISGGHINPAVTFGLFLARKLSLPRALLYMVCQCLGAMCGAGVVKGFNPSQYEVNGGGANTVAHGYT*GDGLGADIVGTFFLVYTVFLATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA*SSGAVIPFDISFACHDHWIFWIVPFIDAAL
A9NNZ4_______________GIAEFMATFLFLYITILTVMGVKRSDDVCTGSVGIQGIAWAFGGMIFCLVYCTAGISGGHINPAVTFGLFLARKLSLPRAVFYMICQCLGAICGAGVVKGFMESEYEMDGGGANSVAHGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPLLAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKSHAWDDHWIFWVGPFLGAGL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain