SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene60257

Length: 1020 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene60257

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	multiprotein-bridging factor 1c [Arabidopsis thaliana] sp\|Q9LV58.1\|MBF1C_ARATH RecName: Full=Multiprotein-bridging factor 1c dbj\|BAB01997.1\| ethylene-responsive transcriptional coactivator-like protein [Arabidopsis thaliana] gb\|AAO44027.1\| At3g24500 [Arab	-	-	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	ethylene-responsive transciptional coactivator-like protein	-	-	79%

Source	GOs	Term	Type	Identity
Blast2go	response to water deprivation	GO:0009414	Biological Process	79%
Blast2go	response to heat	GO:0009408	Biological Process	79%
Blast2go	response to abscisic acid stimulus	GO:0009737	Biological Process	79%
Blast2go	transcription coactivator activity	GO:0003713	Molecular Function	79%
Blast2go	nucleolus	GO:0005730	Cellular Component	79%

Source	InterPros	Term	Type	e value	Identity
Sma3	Helix-turn-helix type 3	IPR001387	-	0.0	-
Sma3	Multiprotein bridging factor 1, N-terminal	IPR013729	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
637		11	82	5	0.999919
638			88	11	0.999952
640	11	88			0.999952

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain