SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene60237

Length: 1321 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene60237

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gb\|AAL15341.1\| At2g47630/F17A22.2 [Arabidopsis thaliana] gb\|AAM14848.1\| putative phospholipase [Arabidopsis thaliana] gb\|AAC63619.2\| putative phospholipase [Arabidopsis thaliana] gb\|AAM	-	-	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	74%
Blast2go	esterase lipase thioesterase family protein	-	-	81%

Source	GOs	Term	Type	e value	Identity
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	81%

Source	InterPros	Term	Type	e value	Identity
Sma3	Alpha/beta hydrolase fold-1	IPR000073	-	0.0	-
Sma3	DNA ligase, ATP-dependent, conserved site	IPR016059	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NQD9

Fln msg: Overlapping hits, possible frame ERROR between 356 and 349,

Fln protein: MLWTRLHENWLLKSRISAFVIESRLLQKTIEPANMSGDQLSNVKYEEEFIESSRGVQLFTCRWLPADREAKAVIFICHGYAMECxxxxMEDTGVRLAKAGYAVFGIDYEGHGKSGGTRCYIQSFDDLVTDCATFFRSVAESIKYKKKARFLYGESMGGVVALLIHRKQPNFWNGALLVAPMCKIAEELKPHPLVIGILKKLAVIIPTWKIVPIQNIIDTGFKEPEKRQKIRANPYIYQDKPRLKTGYELLMASLDIEKRLEEVTLPFLIVHGQDDKVTDPSVSQLLYSSAKSSDKTLKLYPDMWHGLTFGEPLSTLNWCSRISLHGWAREVKQQAGAM*

Protein Length: 340

Fln nts: GTAGTTGTTTATATGGTAAGCAATTTGTTAGAGGGTACTTCGCAATTTCTTTACTTAGAGACAGTCCATATTGAGGAAATATTATTGGAATTGAG_-_ATGCTATGGACAAGACTCCATGAAAATTGGCTACTGAAAAGTAGGATCTCTGCTTTTGTAATTGAATCTAGGCTACTGCAAAAAACAATTGAGCCTGCGAACATGTCAGGGGATCAACTCAGCAACGTTAAATATGAAGAGGAATTTATTGAAAGCTCGCGAGGTGTGCAGCTATTTACGTGCAGATGGCTACCGGCAGATAGAGAAGCCAAAGCCGTAATATTTATCTGCCATGGCTATGCCATGGAGTGCxxxxxxxxxxxxATGGAAGACACAGGAGTGAGGCTAGCAAAGGCTGGGTATGCAGTATTTGGTATAGATTATGAAGGACATGGAAAATCTGGTGGAACACGTTGTTACATACAAAGCTTCGATGACCTTGTAACGGATTGTGCAACTTTTTTCAGAAGCGTAGCTGAGAGTATTAAGTATAAAAAGAAAGCGAGGTTCCTTTACGGTGAATCAATGGGAGGAGTTGTGGCACTGCTCATCCACAGAAAGCAGCCTAACTTTTGGAATGGTGCTCTACTTGTTGCCCCTATGTGCAAGATTGCAGAAGAGTTAAAGCCCCACCCCCTGGTTATCGGCATATTGAAAAAGTTAGCTGTCATAATCCCGACATGGAAGATTGTACCTATTCAGAACATTATAGATACGGGCTTTAAGGAACCAGAAAAGAGACAAAAGATTCGAGCAAATCCCTATATTTATCAAGACAAGCCTCGTCTAAAGACGGGTTACGAGCTCCTCATGGCCAGTTTGGACATAGAGAAACGGCTGGAGGAGGTGACCTTGCCTTTTCTGATTGTTCATGGCCAAGACGATAAAGTAACAGACCCATCTGTGAGCCAATTGCTGTACTCTTCGGCCAAAAGTTCTGACAAGACGCTGAAACTGTACCCTGATATGTGGCATGGTTTGACTTTTGGCGAACCCCTGAGCACGTTGAATTGGTGTTCTCGGATATCATTGCATGGTTGGGCGAGAGAAGTGAAGCAGCAGGCCGGTGCCATGTAA___ACGCCCACTTCCAAAAGTCGAGCGTTTCTGAATCGGCCATGATGTCAGCAGAAAGAGAAAGAAAGCTTTCCAACGACGGCCTGTCTTCAAAGAAAGTACACAACGTATCTTGATGTGAAAAACTGGGAAAAACGAACTGGTTATAACGTATTGGTATGAAAATGTTTTCTGGGTTTTACACCATCACATCCTAACTTTCATTCAACCGACA

Fln Alignment:

AllPineV4_c62082___NMSGDQLSNV-KYEEEFIESSRGVQLFTCRWLPADREAKAVIFICHGYAMECxxxMEDTGVRLAKAGYAVFGIDYEGHGKSGGTRCYIQSFDDLVTDCATFFRSVAESIKYKKKARFLYGESMGGVVALLIHRKQPNFWNGALLVAPMCKIAEELKPHPLVIGILKKLAVIIPTWKIVPIQNIIDTGFKEPEKRQKIRANPYIYQDKPRLKTGYELLMASLDIEKRLEEVTLPFLIVHGQDDKVTDPSVSQLLYSSAKSSDKTLKLYPDMWHGLTFGEP
A9NQD9_______________DMSGVKFSSLLKYEEEFIESSRGVKLFTCRWLPADKEAKALICLCHGYGMECxxxMEDTGVRLAKAGYAVFGIDYEGHGKSAGTRCYIKSFDDLVTDCTTFFKSVAEGVEYREKARFLYGESMGGAVALLIHRKQPNYWSGAVLVAPMCKIAEELKPHPLVISILKKLTTIIPTWKLVPIEDIVDIGFKDPEKRQKIRANPYVYKGRPRLKTGYELLMTSLDIEKRLDEVSLPFLVVHGEDDKVTDPSVSKLLYASAKSFDKTLKLYPDMWHGLTYGEP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain