SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene60151

Length: 568 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene60151

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	chaperone protein dnaJ 11 [Arabidopsis thaliana] sp\|Q9FYB5.2\|DNJ11_ARATH RecName: Full=Chaperone protein dnaJ 11, chloroplastic; Short=AtDjC11; Short=AtJ11; Flags: Precursor emb\|CAA18498.1\| DnaJ-like protein [Arabidopsis thaliana] emb\|CAB81513.1\| DnaJ-lik	-	-	1.0e-13	44%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	61%
Blast2go	chaperone protein dnaj chloroplast	-	-	6.97847e-43	60%

Source	InterPros	Term	Type	e value	Identity
Sma3	Heat shock protein DnaJ, N-terminal	IPR001623	-	0.0	-
Sma3		IPR015609	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 43)

Position	A %	C %	G %	T %	Probability
76	50		50		1.0
99		83		16	0.994513
110		14		85	0.993534
111	85		14		0.993534
112		85		14	0.993534
113	85		14		0.993534
114	83		16		0.994512
115		14		85	0.993533
117	85			14	0.993533
121		16		83	0.994512
123		83	16		0.994512
125		83	16		0.994512
142			83	16	0.994512
143		50		50	1.0
150		42	42		1.0
159		12		87	0.992555
161		87		12	0.992555
166	87			12	0.992555
167	85			14	0.993533
177		14		85	0.993533
187	66			33	1.0
197		16		83	0.994512
211		20	80		0.995493
212		80	20		0.995493
217	14	85			0.993533
218	85			14	0.993533
250		66	33		1.0
253	83			16	0.994512
260	14		85		0.993533
271	83	16			0.994512
283	66		33		1.0
297	66	33			1.0
299		20		80	0.995493
318		80		20	0.995493
319	20		80		0.995493
329	60		40		1.0
339	80		20		0.995493
340	20		80		0.995493
343	20		80		0.995493
390		75		25	0.996473
393		50		50	1.0
410	25		75		0.996473
415	33	66			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain