SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene58791

Length: 190 nt

UniGene Fasta

>sp_v2.0_unigene58791
AATGTTTGAATTTGTCTCTTAACAATCTCAGTGGACCCATTCCGGTGTTTTCACAGAGTTTTGGCAATGAGTCATTTGCAGGAAACAGGCTCTGTGGGCCTCCTCTTCCCCCTTGTGCAGGAACTCAAGTTCAGAGGCGTTCTGGACTGAGCCCTGGGGCAGTTGCAGGAATTGTTATTGCATTGATGAC

Ace file of the UniGene sp_v2.0_unigene58791

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative kinase-like protein TMKL1 n=2 Tax=Arabidopsis RepID=TMKL1_ARATH	-	-	4.0e-09	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	56%
Blast2go	kinase-like protein tmkl1-like	-	-	7.85888e-12	63%

Source	GOs	Term	Type	e value	Identity
Blast2go	catalytic activity	GO:0003824	Molecular Function	7.85888e-12	63%
Blast2go	plasma membrane	GO:0005886	Cellular Component	7.85888e-12	63%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LP80

Fln msg: Distance to subject end: 348 aas, your sequence is shorter than subject: 62 - 657

Fln protein: CLNLSLNNLSGPIPVFSQSFGNESFAGNRLCGPPLPPCAGTQVQRRSGLSPGAVAGIVIALM

Protein Length: 63

Fln nts: AATGTTTGAATTTGTCTCTTAACAATCTCAGTGGACCCATTCCGGTGTTTTCACAGAGTTTTGGCAATGAGTCATTTGCAGGAAACAGGCTCTGTGGGCCTCCTCTTCCCCCTTGTGCAGGAACTCAAGTTCAGAGGCGTTCTGGACTGAGCCCTGGGGCAGTTGCAGGAATTGTTATTGCATTGATGAC

Fln Alignment:

AllPineV4_c59412___LNLSLNNLSGPIPVFSQSFGNESFAGN--RLCGPPLPPCA-GTQVQRRSGLSPGAVAGIVIALM
B8LP80_______________LNFSHNNLTGAIPNFAQNFSQDAFVGNSPALCGAPLQACGKARQIGHRPRLSPGAVAGIVIGLM

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain