SustainPineDB

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Assembly info
Unigenes
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SSRs
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ECs
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene58393

Length: 228 nt

UniGene Fasta

>sp_v2.0_unigene58393
GCAGAGATTGTCTTCACCAATGGTCCTCCAGGGATGCGCGTATTTGACGTTTTCATACAGGATCGCAAGATTCTCTCTGGGTTGGATATATATGCTCGCGTGGGATCGAACACACCACTTGTTCTGCTGGATGCGAGGGCCAAGATTGTTGAAGGCAGTGCTTTATCAATAAGATTCCAGAGTGTTGTGGGTAGTCCTATTGTTTGTGGAATTTGCGTTCGGAAGGCA

Ace file of the UniGene sp_v2.0_unigene58393

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3K9_RICCO	-	-	5.0e-19	61%
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	0.0	60%
Blast2go	atp binding	-	-	2.65582e-24	75%

Source	InterPros	Term	Type	e value	Identity
Sma3	Kinesin, motor domain	IPR001752	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D8TGG9

Fln msg: Distance to subject end: 707 aas, your sequence is shorter than subject: 76 - 879

Fln protein: AEIVFTNGPPGMRVFDVFIQDRKILSGLDIYARVGSNTPLVLLDARAKIVEGSALSIRFQSVVGSPIVCGICVRKA

Protein Length: 77

Fln nts: GCAGAGATTGTCTTCACCAATGGTCCTCCAGGGATGCGCGTATTTGACGTTTTCATACAGGATCGCAAGATTCTCTCTGGGTTGGATATATATGCTCGCGTGGGATCGAACACACCACTTGTTCTGCTGGATGCGAGGGCCAAGATTGTTGAAGGCAGTGCTTTATCAATAAGATTCCAGAGTGTTGTGGGTAGTCCTATTGTTTGTGGAATTTGCGTTCGGAAGGCA

Fln Alignment:

AllPineV4_c58939___AEIVFTNGPPGMRVFDVFIQDRKILSGLDIYARVGSNTPLVLLDARAKIVEGSALSIRFQSVVGSPIVCGICVRKA
D8TGG9_______________AEIIFTNGPPGMRIFDVYIQDEKVVSDLDVYGRVGSNRPLILLNVRA-AVDGGVLTLAFRGVVGNPTISAICVHRA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain