SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene57575

Length: 258 nt

UniGene Fasta

>sp_v2.0_unigene57575
CGTCGTGACCTTGGCTGTCACTCAGTCAGTCTGGTTCTTTTCCCAGTTTGGGCAGGAGAGGACCTTCACCAGATGCTTATAACTAACCTGGAAAATCTCATTGTATCATTTGAAGGATGCGTACAAAAATACTTTGAGGATGAAGTGATCATTAGCTCACCAGATGAGGAGGCTGAATCTGAAGAAACATTGGAGGATCCTATCTATGAAGGATACAGGGCCATTTTAGATTCTAAAGTTGCCGAAGAATCTTTGGCC

Ace file of the UniGene sp_v2.0_unigene57575

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Isoform 3 of Aluminum-activated malate transporter 14 n=1 Tax=Arabidopsis thaliana RepID=Q9LS22-3	-	-	2.0e-11	41%
FL-Next	Isoform 3 of Aluminum-activated malate transporter 14 OS=Arabidopsis thaliana GN=ALMT14	-	-	0.0	44%
Blast2go	aluminum-activated malate transporter 12-like	-	-	5.4561e-14	64%

Source	GOs	Term	Type	e value	Identity
Blast2go	stomatal movement	GO:0010118	Biological Process	5.4561e-14	64%
Blast2go	anion transport	GO:0006820	Biological Process	5.4561e-14	64%
Blast2go	anion transmembrane transporter activity	GO:0008509	Molecular Function	5.4561e-14	64%
Blast2go	endomembrane system	GO:0012505	Cellular Component	5.4561e-14	64%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9LS22-3

Fln msg: Distance to subject end: 268 aas, your sequence is shorter than subject: 86 - 496

Fln protein: RRDLGCHSVSLVLFPVWAGEDLHQMLITNLENLIVSFEGCVQKYFEDEVIISSPDEEAESEETLEDPIYEGYRAILDSKVAEESLA

Protein Length: 87

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGTCAGTCTGGTTCTTTTCCCAGTTTGGGCAGGAGAGGACCTTCACCAGATGCTTATAACTAACCTGGAAAATCTCATTGTATCATTTGAAGGATGCGTACAAAAATACTTTGAGGATGAAGTGATCATTAGCTCACCAGATGAGGAGGCTGAATCTGAAGAAACATTGGAGGATCCTATCTATGAAGGATACAGGGCCATTTTAGATTCTAAAGTTGCCGAAGAATCTTTGGCC

Fln Alignment:

AllPineV4_c57973___CHSVSLVLFPVWAGEDLHQMLITNLENLIVSFEGCVQKYFEDEVIISSPDXXXXXXXXXXDPIYEGYRAILDSKVAEESLA
Q9LS22-3_____________CLLMSLLVFPIWSGEDLHKSTVAKLQGLSYSIEACVNEYFEEE------EKDEETSDLSEDTIYNGYKTVLDSKSADEALA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain