SustainPineDB

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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene56309

Length: 353 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v2.0_unigene56309
GCAATCCTGATAAACCATCTCTCCTGATAAGCCAGAGAGCACTTGCCAGTACTCTTATCTCTGAATTGAGGAACCGCTATCCAAAGGATCAGTTAGAGATTCACTTTGAGAAGCATTGTGTTTGGGCAGATTTCGATGCCCATACTGTGACATTTGGCAGAATAAATGAAGAGCCTGTCCAATACAATCTGCTTGTTGGAGCTGATGGAGTCAGATCTACTGTTCGACAGGAATTCATCAAGCAGCAGGGTTTCAACTATCAACAAATCAACATGCCTTACACATTCAAAGTTCTTCATGTGTCAAAGCCTCCAGTTTTGACTCCAAATGCAGTGCACACCTTCAGAAACGGT

Ace file of the UniGene sp_v2.0_unigene56309 (antisense)

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

Go to the Tablet ACE viewer Web

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	vioC monooxygenase [Nodularia spumigena CCY9414] gb\|EAW47137.1\| vioC monooxygenase [Nodularia spumigena CCY9414]	-	-	1.0e-10	33%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	63%
Blast2go	kynurenine 3-monooxygenase	-	-	1.33263e-42	58%

Source	InterPros	Term	Type	e value	Identity
Sma3	Monooxygenase, FAD-binding	IPR002938	-	0.0	-
Sma3	Aromatic-ring hydroxylase-like	IPR003042	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9TW57

Fln msg: Distance to subject end: 244 aas, your sequence is shorter than subject: 117 - 464

Fln protein: NPDKPSLLISQRALASTLISELRNRYPKDQLEIHFEKHCVWADFDAHTVTFGRINEEPVQYNLLVGADGVRSTVRQEFIKQQGFNYQQINMPYTFKVLHVSKPPVLTPNAVHTFRNG

Protein Length: 118

Fln nts: GCAATCCTGATAAACCATCTCTCCTGATAAGCCAGAGAGCACTTGCCAGTACTCTTATCTCTGAATTGAGGAACCGCTATCCAAAGGATCAGTTAGAGATTCACTTTGAGAAGCATTGTGTTTGGGCAGATTTCGATGCCCATACTGTGACATTTGGCAGAATAAATGAAGAGCCTGTCCAATACAATCTGCTTGTTGGAGCTGATGGAGTCAGATCTACTGTTCGACAGGAATTCATCAAGCAGCAGGGTTTCAACTATCAACAAATCAACATGCCTTACACATTCAAAGTTCTTCATGTGTCAAAGCCTCCAGTTTTGACTCCAAATGCAGTGCACACCTTCAGAAACGGT

Fln Alignment:

AllPineV4_c56416___NPDKPSLLISQRALASTLISELRNRYPKDQLEIHFEKHCVWADFDAHTVTFGRINEEPVQYNLLVGADGVRSTVRQEFIKQQGFNYQQINMPYTFKVLHVSKPPVLTPNAVHTFR
A9TW57_______________NPGKPSLLINQRALAATLVSELESRYSKDDLEVNFNTRCERVDFKSRTVSFNGKSENPVSYNLLVGADGARSAVRNEFITQRGFDYKQTNMPYTFKVLYVPRPPELSEEAVHAFR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain