SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene52495

Length: 745 nt

Origin of reads: Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene52495

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Beta-glucosidase G4 n=1 Tax=Medicago truncatula RepID=A8TVR1_MEDTR	-	-	4.99997e-41	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%
Blast2go	beta-glucosidase g4	-	-	2.08793e-43	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	cellular response to ethylene stimulus	GO:0071369	Biological Process	2.08793e-43	79%
Blast2go	cellular response to iron ion	GO:0071281	Biological Process	2.08793e-43	79%
Blast2go	cellular response to nitric oxide	GO:0071732	Biological Process	2.08793e-43	79%
Blast2go	hydrolase activity	GO:0016787	Molecular Function	2.08793e-43	79%

Source	InterPros	Term	Type	Identity
Sma3	Glycoside hydrolase, family 1	IPR001360	-	-
Sma3	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	-
Sma3	Glycoside hydrolase, family 1, beta-glucosidase	IPR017736	-	-
Sma3	Glycoside hydrolase, family 1, active site	IPR018120	-	-

Full-Lengther Next Prediction

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
69	40	40		20	1.0
71	40	20		40	1.0
72	20	40		40	1.0
76	40			60	1.0
83	60		40		1.0
91			60	40	1.0
323			75	25	0.996474

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain