SustainPineDB

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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene50979

Length: 288 nt

Origin of reads: Uma v2

UniGene Fasta

>sp_v2.0_unigene50979
GAGAGCCATTCTGGAGCGTTCCCTTTGGTAGGAAAGACGGTCGCATCTCCCTAGCAAGGGAAACATATATCGTTCCGCAAGGCCATGAAAATTTGACTGCATTGATAGAATTGTTCCAGTCAAGGGGACTCACTATTCTTGATTTAGTTATTCTTTCAGGGTGCCCACACAATTGGGAGAAGCGTTTGCAGTGTGATACAGGACAGGCTTTACAACTTCAATGGCACCCGCAAGCCTGATCCAACCATGGATCCCACATATGTTACATACCTGAAAAAAAGTGCACTT

Ace file of the UniGene sp_v2.0_unigene50979

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	peroxidase 7 [Arabidopsis thaliana] sp\|Q9SY33.1\|PER7_ARATH RecName: Full=Peroxidase 7; Short=Atperox P7; AltName: Full=ATP30; Flags: Precursor gb\|AAD32944.1\|AC004135_19 T17H7.19 [Arabidopsis thaliana] gb\|AAF98194.1\|AC000107_17 F17F8.26 [Arabidopsis thalia	-	-	1.0e-17	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	43%
Blast2go	peroxidase 7-like	-	-	5.05743e-27	78%

Source	InterPros	Term	Type	Identity
Sma3	Plant peroxidase	IPR000823	-	-
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-
Sma3	Peroxidase, active site	IPR019794	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9P1P4

Fln msg: Overlapping hits, possible frame ERROR between 161 and 160, Distance to subject end: 90 aas, your sequence is shorter than subject: 96 - 324

Fln protein: EPFWSVPFGRKDGRISLARETYIVPQGHENLTALIELFQSRGLTILDLVILSxxAHTIGRSVCSVIQDRLYNFNGTRKPDPTMDPTYVTYLKKSAL

Protein Length: 97

Fln nts: GAGAGCCATTCTGGAGCGTTCCCTTTGGTAGGAAAGACGGTCGCATCTCCCTAGCAAGGGAAACATATATCGTTCCGCAAGGCCATGAAAATTTGACTGCATTGATAGAATTGTTCCAGTCAAGGGGACTCACTATTCTTGATTTAGTTATTCTTTCAxxxxxxGCCCACACAATTGGGAGAAGCGTTTGCAGTGTGATACAGGACAGGCTTTACAACTTCAATGGCACCCGCAAGCCTGATCCAACCATGGATCCCACATATGTTACATACCTGAAAAAAAGTGCACTT

Fln Alignment:

AllPineV4_c50088___PFWSVPFGRKDGRISLARETYI-VPQGHENLTALIELFQSRGLTILDLVILSxAHTIGRSVCSVIQDRLYNFNGTRKPDPTMDPTYVTYLK
A9P1P4_______________PFWNVPTGRRDGVVSIQNEAVAKLPPPNGTFSKLKSIFASNGLDVKDLVVLSxGHTIGMSHCNSFSSRLYNFTGKGDMDPSLDKSYAAHLK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain