SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene49747

Length: 262 nt

UniGene Fasta

>sp_v2.0_unigene49747
CGTCGTGACCTTGGCTGTCACTCAAGCTTTAAGAGAGATTTATCGTGTGTTAAACAGGTTCAACAGTATCTATTTTGGATTTAACAGGAGTTCAACAGCACTACTATTTCATCCAGGATTGGATTCTGGACAACGTTGTTGTTCCAGTTGCAAACGGATATGGACTTGGAGATGATTATGCATACTTGAAACTTCAATTGCTAACTTTCCTACAGGCAAGCAGCAAGAGAAGTTGGCTTTAGAAGTGGGATTTTCAAGAGCA

Ace file of the UniGene sp_v2.0_unigene49747

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	[H] COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis	-	-	2.0e-05	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	50%
Blast2go	2-phytyl- -naphtoquinone chloroplastic-like	-	-	9.38829e-15	61%

Source	GOs	Term	Type	e value	Identity
Blast2go	phylloquinone biosynthetic process	GO:0042372	Biological Process	9.38829e-15	61%
Blast2go	chloroplast	GO:0009507	Cellular Component	9.38829e-15	61%
Blast2go	2-phytyl-1,4-naphthoquinone methyltransferase activity	GO:0052624	Biological Process	9.38829e-15	61%

Source	InterPros	Term	Type	e value	Identity
Sma3	UbiE/COQ5 methyltransferase	IPR004033	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NSD5

Fln msg: warning!, putative chimeric sequence! or repetitive structureDistance to subject end: 17 aas, your sequence is shorter than subject: 87 - 282

Fln protein: VVTLAVTQALREIYRVLNRFNSIYFGFNRSSTALLFHPGLDSGQRCCSSCKRIWTWR*LCILETSIANFPTGKQQEKLALEVGFSRA

Protein Length: 88

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAGCTTTAAGAGAGATTTATCGTGTGTTAAACAGGTTCAACAGTATCTATTTTGGATTTAACAGGAGTTCAACAGCACTACTATTTCATCCAGGATTGGATTCTGGACAACGTTGTTGTTCCAGTTGCAAACGGATATGGACTTGGAGATGATTATGCATACTTGAAACTTCAATTGCTAACTTTCCTACAGGCAAGCAGCAAGAGAAGTTGGCTTTAGAAGTGGGATTTTCAAGAGCA

Fln Alignment:

AllPineV4_c48593___VTQALREIYRVLNRFNSI-YFGFNRSS--TALLFHPGLDSGQRCCSSCKRIWTWR*LCILETSIANFPTGKQQEKLALEVGFSRA
A9NSD5_______________ITQALREIYRVLGTGSTVSILDFNRSSNSTTTIFIQDWVLDNVVVPVANGYGLGDDYAYLKTSIANFPTGKQQEKLALEVGFSRA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain