SustainPineDB

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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene49521

Length: 179 nt

UniGene Fasta

>sp_v2.0_unigene49521
ATCAGATGTTGCCGACGAGCGTGAGAGTGGCGCTGAGGTCCAGGCTCAAGTCTTATGCAAAGAATTTAGCATCCACAGTCTATGATGCACCTCTTGCAGCTGATTGGAAAGATGCTTTGGAAAGATATTGGGATGGCTGGCCCCACTGGCACACAACATGCTTAAGTGGCAGTCTGAGC

Ace file of the UniGene sp_v2.0_unigene49521

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF668 domain containing protein	-	-	1.0e-10	53%
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	70%
Blast2go	protein	-	-	4.16045e-13	81%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF668	IPR007700	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9STJ4

Fln msg: Overlapping hits, possible frame ERROR between 125 and 122, Distance to subject end: 77 aas, your sequence is shorter than subject: 59 - 588

Fln protein: QMLPTSVRVALRSRLKSYAKNLASTVYDAPLAADWKDALxxxLGWLAPLAHNMLKWQSE

Protein Length: 60

Fln nts: ATCAGATGTTGCCGACGAGCGTGAGAGTGGCGCTGAGGTCCAGGCTCAAGTCTTATGCAAAGAATTTAGCATCCACAGTCTATGATGCACCTCTTGCAGCTGATTGGAAAGATGCTTTGxxxxxxxxxTTGGGATGGCTGGCCCCACTGGCACACAACATGCTTAAGTGGCAGTCTGAGC

Fln Alignment:

AllPineV4_c48332___QMLPTSVRVALRSRLKSYAKNLASTVYDAPLAADWKDALExILGWLAPLAHNMLKWQSE
B9STJ4_______________QMLPTSLRMSLRINLKSYIKNLA--IYDAPLAHDWKDTLDxILKWLAPLAHNMIRWQSE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain