SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene48924

Length: 558 nt

UniGene Fasta

>sp_v2.0_unigene48924
TTTCAGCACTCAAATATTGACAAAGAAGAGTGATGTGTATAGCTTTGGAGTGGTTTTGCTGGAGATTATATGTGGTAGACAACCTATAGATCAAAAACTACCTTTAGAGGAACTGAACATCATTAGATGGGTGACACCGTATGTACTAGGGAGTGATAATCCTTGCACAATAGCAAAAATCATTGACAAGAGGTTGGGTAGACGTTACGACGAGATATCCATAAGTGTTGTTGCCAAATTAGCGATGAGGTGCGTTCAGGCTGAACCGTCTTCGAGGCCGAGCGTGAGTGAGATTGTGGCAGAGCTAAGAGAGGCCATCAACATTGAGGATAAGGTTTCACTTCCATTTTCAGAGGAGATTGGTATGGAAAGTAGCGATTTGTTGTCAGCGGCGGTGTCTTTATCTGTGGATTCGAGTGGGCCTGGAGGCCGAATGGAGTGGAGTGCCAACAATTCCAACATTTCTCATGTCAAGGCGATGAGCCCGCACAGTCATGTTGAGGGTTGGGTGGAATAGAGGTTGCCGAGGAAGTCAGACCATGACATAGTGTACATTAC

Ace file of the UniGene sp_v2.0_unigene48924

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO	-	-	3.0e-21	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	40%
Blast2go	receptor-like kinase	-	-	9.13089e-24	63%

Source	GOs	Term	Type	e value	Identity
Blast2go	defense response to insect	GO:0002213	Biological Process	9.13089e-24	63%
Blast2go	defense response to fungus	GO:0050832	Biological Process	9.13089e-24	63%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LRT7

Fln msg: your sequence is shorter than subject: 172 - 484

Fln protein: FSTQILTKKSDVYSFGVVLLEIICGRQPIDQKLPLEELNIIRWVTPYVLGSDNPCTIAKIIDKRLGRRYDEISISVVAKLAMRCVQAEPSSRPSVSEIVAELREAINIEDKVSLPFSEEIGMESSDLLSAAVSLSVDSSGPGGRMEWSANNSNISHVKAMSPHSHVEGWVE*

Protein Length: 173

Fln nts: TTTCAGCACTCAAATATTGACAAAGAAGAGTGATGTGTATAGCTTTGGAGTGGTTTTGCTGGAGATTATATGTGGTAGACAACCTATAGATCAAAAACTACCTTTAGAGGAACTGAACATCATTAGATGGGTGACACCGTATGTACTAGGGAGTGATAATCCTTGCACAATAGCAAAAATCATTGACAAGAGGTTGGGTAGACGTTACGACGAGATATCCATAAGTGTTGTTGCCAAATTAGCGATGAGGTGCGTTCAGGCTGAACCGTCTTCGAGGCCGAGCGTGAGTGAGATTGTGGCAGAGCTAAGAGAGGCCATCAACATTGAGGATAAGGTTTCACTTCCATTTTCAGAGGAGATTGGTATGGAAAGTAGCGATTTGTTGTCAGCGGCGGTGTCTTTATCTGTGGATTCGAGTGGGCCTGGAGGCCGAATGGAGTGGAGTGCCAACAATTCCAACATTTCTCATGTCAAGGCGATGAGCCCGCACAGTCATGTTGAGGGTTGGGTGGAATAG___AGGTTGCCGAGGAAGTCAGACCATGACATAGTGTACATTAC

Fln Alignment:

AllPineV4_c47625___LTKKSDVYSFGVVLLEIICGRQPIDQKLPLEELNIIRWVTPYVLGSDNPCTIAKIIDKRLGRRYDEISISVVAKLAMRCVQAEPSSRPSVSEIVAELREAINIEDKVSLPF
B8LRT7_______________LTSRSDVYSFGVVLLEMLTGRRSMDKSRPSGEHNLVEWARPY-LGEKR--RLYRLIDPRLDGNFSIKGAQKAAQLACHCLSRDPKARPLMSEVVEALRPLLNLKDMASSSF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain