SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene47572

Length: 272 nt

UniGene Fasta

>sp_v2.0_unigene47572
GCAAATCTGCCTCGTGGTCCACTCGGCTTGTATCACAAAGAGATGATCCCATTAATTTGAGAGGCTAGAGCCTCCTCCGCATTCAGCTGAGAGAAATGACAACATATTGCGAGAGACTCCCATTCCACTAACCCTCGATCACAGCAAAGTTGCAAAGCTAGGTCATCCCTTCCACCATTGCAGCCTCTATCAATCACGAGGAGGTGCTTGGAAGAATGGCCTAAAGCAGGATCTGACGACATTGGAGAATGGCCGAATCCTACAACAACATT

Ace file of the UniGene sp_v2.0_unigene47572

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	phosphatase-like protein [Arabidopsis thaliana]	-	-	4.0e-13	71%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	77%
Blast2go	map kinase phosphatase	-	-	2.54739e-19	84%

Source	ECs	Term	Type	e value	Identity
Blast2go	Hydrolases, Acting on ester bonds, Phosphoric monoester hydrolases.	EC:3.1.3.-	-	2.54739e-19	84%

Source	KEGGs	Term	e value	Identity
Blast2go	Fructose and mannose metabolism	00051	2.54739e-19	84%
Blast2go	Ascorbate and aldarate metabolism	00053	2.54739e-19	84%
Blast2go	Lipopolysaccharide biosynthesis	00540	2.54739e-19	84%
Blast2go	Ether lipid metabolism	00565	2.54739e-19	84%
Blast2go	Sphingolipid metabolism	00600	2.54739e-19	84%
Blast2go	Thiamine metabolism	00730	2.54739e-19	84%
Blast2go	Riboflavin metabolism	00740	2.54739e-19	84%
Blast2go	Nicotinate and nicotinamide metabolism	00760	2.54739e-19	84%
Blast2go	Metabolic pathways	01100	2.54739e-19	84%
Blast2go	Biosynthesis of secondary metabolites	01110	2.54739e-19	84%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to UV-C	GO:0010225	Biological Process	2.54739e-19	84%
Blast2go	response to salt stress	GO:0009651	Biological Process	2.54739e-19	84%
Blast2go	phosphatase activity	GO:0016791	Molecular Function	2.54739e-19	84%

Source	InterPros	Term	Type	Identity
Sma3	Dual specificity phosphatase, catalytic domain	IPR000340	-	-
Sma3	Protein-tyrosine/Dual-specificity phosphatase	IPR000387	-	-
Sma3	Phosphotransferase system, HPr serine phosphorylation site	IPR002114	-	-
Sma3	Gelsolin domain	IPR007123	-	-
Sma3	Protein-tyrosine phosphatase, active site	IPR016130	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A5C1W4

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 743 aas, your sequence is shorter than subject: 90 - 856

Fln protein: ANLPRGPLGLYHKEMIPLI*EARASSAFS*EK*QHIARDSHSTNPRSQQSCKARSSLPPLQPLSITRRCLEEWPKAGSDDIGEWPNPTTT

Protein Length: 91

Fln nts: GCAAATCTGCCTCGTGGTCCACTCGGCTTGTATCACAAAGAGATGATCCCATTAATTTGAGAGGCTAGAGCCTCCTCCGCATTCAGCTGAGAGAAATGACAACATATTGCGAGAGACTCCCATTCCACTAACCCTCGATCACAGCAAAGTTGCAAAGCTAGGTCATCCCTTCCACCATTGCAGCCTCTATCAATCACGAGGAGGTGCTTGGAAGAATGGCCTAAAGCAGGATCTGACGACATTGGAGAATGGCCGAATCCTACAACAACATT

Fln Alignment:

AllPineV4_c46085___PRSQQSCKARSSLPPLQPLSITRRCLEEWPKAGSDDIGEWPNPTT
A5C1W4_______________PRSQQNCKARACLPPLQPLSIARRSLDEWPKASSDDVGEWPQPPT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain